KEGG   Phocoena phocoena (harbor porpoise): 136126586
Entry
136126586         CDS       T11058                                 
Symbol
MYOD1
Name
(RefSeq) myoblast determination protein 1
  KO
K09064  myogenic factor 3
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    136126586 (MYOD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pphc03000]
    136126586 (MYOD1)
Transcription factors [BR:pphc03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Myogenic transcription factors
    136126586 (MYOD1)
SSDB
Motif
Pfam: Basic Myf5 HLH
Other DBs
NCBI-GeneID: 136126586
NCBI-ProteinID: XP_065737906
LinkDB
Position
8:71917013..71919728
AA seq 319 aa
MELLSPPIRDVDLTGPDSSLCNFATADDFYDDPCFDSPDLRFFEDLDPRLVHVGALLKPE
EHSHFPAAAHPVPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR
RLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYA
PGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYEGTYYNEAPNEPRP
GKSAAVSSLDCLSSIVERISTESPATPALLLADAPPASSPGRQEAAAGSEVDRGSPTPSP
DTAPQCPAGANPNPIYQVL
NT seq 960 nt   +upstreamnt  +downstreamnt
atggagctgctttcgccgccgatccgcgacgtagacttgacgggccccgacagctctctg
tgcaactttgcaacagcggacgacttctatgatgacccgtgtttcgactccccggacctg
cgcttcttcgaggacctggatccgcgcctcgtgcacgtgggcgcgctcctgaagcccgag
gaacactcgcacttccctgcggccgcgcacccggtgccgggcgcgcgcgaggatgagcat
gtgcgcgcgcccagcgggcaccaccaggcgggccgctgtctactgtgggcctgcaaggcg
tgcaaacgcaagaccactaacgcggaccgccgcaaggccgctaccatgcgcgagcggcgc
cgcctgagcaaagtcaacgaggccttcgagacgctcaagcgctgcacgtctagcaaccca
aaccagcggctgcccaaggtggagatcctgcgcaacgccatccgctacatcgaaggtctg
caggcgctgcttcgcgaccaggacgccgcgccccctggtgctgccgctgccttttacgcg
cctggccctttgcccccaggccgcggcggcgagcactacagcggcgactcggacgcgtcc
agtccgcgctccaattgctccgacggcatgatggactacagcggccccccgagcggtgcc
cggcggcggaactgctacgaaggcacctactacaacgaggcgcccaacgaaccccggccc
gggaagagtgctgcggtgtcgagcctcgactgcctgtccagcatcgtggagcgcatctcc
accgagagccccgccactcccgctcttctgctggccgacgcgccgccggcgtcgtctcca
ggccggcaagaggcggccgccgggagcgaggtcgaccgcggcagccccaccccttccccc
gacaccgcccctcagtgcccagcgggtgcgaaccccaacccgatctaccaggtgctctga

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