Phocoena phocoena (harbor porpoise): 136126586
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Entry
136126586 CDS
T11058
Symbol
MYOD1
Name
(RefSeq) myoblast determination protein 1
KO
K09064
myogenic factor 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
136126586 (MYOD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136126586 (MYOD1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Myogenic transcription factors
136126586 (MYOD1)
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Gene cluster
GFIT
Motif
Pfam:
Basic
Myf5
HLH
Motif
Other DBs
NCBI-GeneID:
136126586
NCBI-ProteinID:
XP_065737906
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Position
8:71917013..71919728
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AA seq
319 aa
AA seq
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MELLSPPIRDVDLTGPDSSLCNFATADDFYDDPCFDSPDLRFFEDLDPRLVHVGALLKPE
EHSHFPAAAHPVPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR
RLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYA
PGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYEGTYYNEAPNEPRP
GKSAAVSSLDCLSSIVERISTESPATPALLLADAPPASSPGRQEAAAGSEVDRGSPTPSP
DTAPQCPAGANPNPIYQVL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctttcgccgccgatccgcgacgtagacttgacgggccccgacagctctctg
tgcaactttgcaacagcggacgacttctatgatgacccgtgtttcgactccccggacctg
cgcttcttcgaggacctggatccgcgcctcgtgcacgtgggcgcgctcctgaagcccgag
gaacactcgcacttccctgcggccgcgcacccggtgccgggcgcgcgcgaggatgagcat
gtgcgcgcgcccagcgggcaccaccaggcgggccgctgtctactgtgggcctgcaaggcg
tgcaaacgcaagaccactaacgcggaccgccgcaaggccgctaccatgcgcgagcggcgc
cgcctgagcaaagtcaacgaggccttcgagacgctcaagcgctgcacgtctagcaaccca
aaccagcggctgcccaaggtggagatcctgcgcaacgccatccgctacatcgaaggtctg
caggcgctgcttcgcgaccaggacgccgcgccccctggtgctgccgctgccttttacgcg
cctggccctttgcccccaggccgcggcggcgagcactacagcggcgactcggacgcgtcc
agtccgcgctccaattgctccgacggcatgatggactacagcggccccccgagcggtgcc
cggcggcggaactgctacgaaggcacctactacaacgaggcgcccaacgaaccccggccc
gggaagagtgctgcggtgtcgagcctcgactgcctgtccagcatcgtggagcgcatctcc
accgagagccccgccactcccgctcttctgctggccgacgcgccgccggcgtcgtctcca
ggccggcaagaggcggccgccgggagcgaggtcgaccgcggcagccccaccccttccccc
gacaccgcccctcagtgcccagcgggtgcgaaccccaacccgatctaccaggtgctctga
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