Phocoena phocoena (harbor porpoise): 136126617
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Entry
136126617 CDS
T11058
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136126617 (MSH4)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
136126617 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND_NTPase5
AAA_22
ATPase_2
AAA_28
AAA_31
AAA_23
Motif
Other DBs
NCBI-GeneID:
136126617
NCBI-ProteinID:
XP_065737966
LinkDB
All DBs
Position
1:66104918..66201630
Genome browser
AA seq
934 aa
AA seq
DB search
MLSPEVPPTSPSAPAVSPSLVEARSQGPRYNFGLQETPQRCPSAQAASSSSPPGTSGAAG
DRSGSSSLPRHPPSARPAQDSYFTNKRSYAENTLASHFTLGTSSSSAQDSNYPQILKTPL
SAGNPQRPGYKSWTLQMEYSATSSSAVSAHSPSVIVAVVEGRGLARGEIGMASIDLKSPQ
IILSQFADNTTYAKVITKLKILSPLEIIMSNTACVVGKSTKLFTLITENFKNVNFTTIQR
KYFNETKGLEYIEQLCITEFNTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKIC
FQGSEQTAMIDSSSTQNLELIINNQDSRSNHTLFGVLNYTKTPGGSRRLRSNILEPLIDV
ETINMRLDCVQELLQDEELFFGLQSVLARFLDTEQLLSVLVQIPKQDTINAAESKITNLI
YLKHTLELVDPLKITLKNCNTPLLRAYYGSLEDKRFVIILDKIKTVINDDARYMKGCLNM
RTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYSLPLRTSFSSARGFFIQMT
TDCTALPNDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSE
IYEHIHCLHKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKHGWHPILEKISVEKP
VANNTYITEGSNFFIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYASFRIAEQIFTR
ISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLL
RLKAFTLFATHFLELCHIDVLYPNVENVHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKN
YGLKAAEVSSLPPSIVLDAKEITSQITRQILQSQRSTPEMERQRAVYHLATRLVQTARNS
QLDPDSLRTYLSNLKKKYEADFPRAKQVSGNTEE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtcctgaggtcccaccaacttcgccttctgcccctgcagtttccccttccttg
gtagaggctcggtcccagggtccccgctacaatttcggactccaggagactcctcagaga
tgtccttcagcccaggccgcctcttcgtcctcccctccaggcacgtctggagcggcgggc
gaccggagcggcagcagcagccttcctcggcacccgcccagcgcgcggccagctcaagat
tcatactttacaaacaaaagatcttatgcagaaaacacacttgcatcacattttactctc
ggtacaagctcatcctctgcgcaagatagtaattatcctcaaatactaaaaactccatta
tctgctggaaatccccagagaccaggttataaaagttggacactgcaaatggaatattca
gctacatcctcatctgcagtttctgcacactctccatcagttattgtagctgttgtagaa
gggagaggacttgccagaggtgaaataggaatggcaagtattgatttaaaaagcccacaa
attatattatctcagtttgcagacaacacaacatatgcaaaggtgatcactaaactcaaa
attttatcacctttggaaataataatgtcaaatactgcttgtgttgtggggaagtcaacc
aagttgtttactctcatcacagaaaatttcaagaacgttaatttcactactatccaaagg
aaatacttcaatgaaacaaaaggattagagtacattgaacaattatgcataacagaattc
aacactgtcctaatggaggttcaatccaagtattactgccttgcagctgttgcagcttta
ttaaaatatgttgaatttattcaaaattcagtttacgcaccaaaatcgctgaagatttgt
ttccagggtagtgaacagacagctatgatagattcatcatcaacccaaaacctcgaatta
ataattaataatcaagactctaggagcaatcacacactctttggtgttctaaattacact
aagactcctggaggaagtagaagacttcgttctaatatattagaacctctaattgatgtt
gaaaccattaacatgaggttagattgtgttcaagaactgcttcaagatgaggaactcttt
tttggacttcagtcagttttagcaagatttcttgatacagagcagcttctttctgtttta
gtccaaattccaaagcaagacacgattaatgcagctgaatcaaagataacaaatttaata
tacctaaaacataccttggaactcgtggatcctttaaagattactctgaagaactgtaac
acacctttattaagagcttactatggttccttggaagataagaggtttgtaatcatactt
gacaagattaaaacagtaattaatgatgatgcaagatacatgaaaggatgcctgaacatg
aggactcagaagtgctatgcagtgaggtctaacataaatgaatttcttgacatagccaga
agaacatatacagagattgtagatgacatagcaggaatgatatcgcagcttgcagaaaaa
tacagtcttcctttaaggacaagttttagctctgctcgaggatttttcattcagatgact
acagattgtacagccctacccaatgatcagcttccttcagagtttattaagatttctaaa
gtgaaaaattcttacagctttacatcagcagatttaattaaaatgaatgaaagatgccaa
gagtctttgagagaaatctatcacatgacttacatgatagtgtgcaaactgcttagtgag
atttatgaacatattcattgcttacataaactgtctgacactgtgtcaatgctggatatg
ctactgtcatttgctcatgcctgcactctttctgactatgttcggccagagtttactgat
actttagcaatcaaacatggatggcaccccatacttgaaaaaatatctgtggaaaaacct
gttgccaacaatacctatattacagaaggcagtaatttttttatcataactggaccaaat
atgagtgggaaatccacatatttgaaacagattgctctttgtcagattatggcccagatt
ggatcatatgttccagcagaatatgcttcttttagaattgctgaacagatttttacaaga
ataagtactgatgatgatattgaaacaaattcatcaacatttatgaaggaaatgaaagag
atagcatatattctacataatgctaatgacaaatcactcatattaattgatgaacttggc
agaggtactaatacagaagaaggtattggcatttgttacgctgtttgtgaatatctgctg
agattaaaggcatttacactgttcgctacacatttcctggaactatgccatatagatgtt
ctatatcctaatgtagaaaacgtgcattttgaagttcaacatgtaaagaacacctcaaga
aataaagaagcaatcttgtatacctacaaactttctaagggacttacagaagaaaaaaat
tatgggttaaaagctgcagaggtgtcgtcactcccaccatcaattgtcttggatgccaaa
gaaatcacaagtcaaataaccagacaaattttgcaaagccaaaggagtacccctgagatg
gaaagacagagagctgtgtaccatctagctactaggctcgttcaaactgctcgaaactct
caattggatccagacagtttacgaacatatttaagtaatctcaaaaagaagtatgaagca
gattttcccagggctaaacaagtttcaggaaacactgaagaataa
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