Phocoena phocoena (harbor porpoise): 136126666
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Entry
136126666 CDS
T11058
Symbol
TAF6L
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136126666 (TAF6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136126666 (TAF6L)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136126666 (TAF6L)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136126666 (TAF6L)
Coactivators
SAGA/TFTC/STAGA complex
136126666 (TAF6L)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136126666 (TAF6L)
STAGA complex
136126666 (TAF6L)
TFTC complex
136126666 (TAF6L)
SAGA complex
136126666 (TAF6L)
SLIK complex
136126666 (TAF6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
136126666
NCBI-ProteinID:
XP_065738062
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All DBs
Position
8:101142797..101154356
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AA seq
626 aa
AA seq
DB search
MQSSIGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALALRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNKGGPGSRGCPRSDDLPWDSLLLQESPSGGSAEP
GFGSGLPLPPGGAGPEAPSPSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKK
EPAAAPDSVRKMPQLTANAMVSPQGDESPRGGGPPSASAPTASESRPLPRVHRARGAPRQ
QGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQ
KLPMIGRTGRPARRWALSDYSLYLPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagttccatcggggccatgtcggagcgagaagagcggcggttcgtggagatccct
cgggagtccgtccggctcatggcagagagcacaggcctggagctgagtgatgaggtggcg
gccctgctcgcagaggacgtgtgctaccgtctcagagaggccacccagaatagctctcaa
ttcatgaaacataccaaacggcggaagctgactgtcgaggatttcaacagggccctcaga
tggagcagtgtggaggctgtgtgtggttatgggtcccaggaggcgctggccctgcgccct
gccagggagggtgagctctacttccccgaggaccgagaggtgaacctggtggagctggcc
ctggccaccaacatccccaaaggctgcgccgagacagctgtgagagttcatgtctcctac
ctagatggcaaagggaacctggcccctcaaggatcggtgcccagtgctgtgtcttcactg
actgatgaccttctcaagtactaccagcaagtgactcgggctgtgctgggggatgatcca
cagctgatgaaggttgccctccaggacttgcagaccaactcgaagattgcggcgctcctg
ccatactttgtttatgtggtcagtggggtgaaatctgtaagccacgacctggagcagcta
caccggctcttgcaagtggcacggagcctagttcggaacccacacctctgcctggggccc
tatgtccgctccctggtaggcagtgtcctctactgtgtcctggagccactggctgcctcc
atcaacccgctgaatgaccactggactctgcgggatggagctgccctcctgctcagtcac
atcttctggactcatggggaccttgtaagcggcctctatcagcagatcctgctctccctg
cagaaggtcttggcagatcctgtgaggcctctctgctctcactacggggctgtggtgggg
ctgcacgcccttggctggaaggcagtagagcgagtcctgtacccacacctgtccacttac
tggacaaatttgcaggctgtgctagatgattattcagtatcgaatgcccaggttaaagca
gatgggcacaaagtctatggagccattctggtggccgtagaacgactgctgaagatgaag
gcccaggcagcagagcccaacaagggtgggccaggcagcaggggctgcccccgctcagac
gacctgccctgggacagccttctcctgcaggagtctccctccgggggcagcgcagagccc
ggctttgggtctggtctcccgctgccgccaggaggcgcggggcccgaggctccttcccct
tcggtgaccctggcggacatctaccgggagctctacgccttcttcggtgacagcttggcc
acccgctttggcacgggtcagcccgcgcccacggccccgcggccgcctggggacaagaag
gagccggcggccgccccggactcggtgcggaagatgccgcagctgaccgccaacgccatg
gtcagcccgcagggcgacgagagcccccggggcggaggccccccgtcggcctctgccccc
accgcctctgagagcaggccgctgccgcgcgtgcaccgggcgcggggggcgccccggcag
cagggcccgggcgccggcacccgcgacgtcttccagaagagccgtttcgccccgcgcggt
gcccctcacttccgtttcatcatcgccgggcggcaagcagggaggcgatgccgcgggcgc
ctcttccagactgccttccccgcgccgtacgggcccagcccggcctcccgttatgtgcag
aagctgcccatgatcggccgcaccggccgcccggcccgccgctgggcgctctcggactac
tcgctgtacctgccgctttga
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