Phocoena phocoena (harbor porpoise): 136126686
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Entry
136126686 CDS
T11058
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
pphc03420
Nucleotide excision repair
pphc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136126686 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
136126686 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
136126686 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136126686 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136126686 (GTF2H1)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136126686 (GTF2H1)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136126686 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
136126686
NCBI-ProteinID:
XP_065738105
LinkDB
All DBs
Position
8:72417690..72449194
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AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTTDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIRENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcatctgaagaagttttgctgattgtaaagaaggtgcgacaaaagaagcag
gatggagctctgtacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcaacttcagctggtcctgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaagaccttcttcagcagctgctg
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaggtgatcagtgctgag
gaattctgggccaatcgtttaaatgtgaatgcaacagagagttcttccacatctaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccgaccccaaacagatgga
tgtaatggtctgagatacaatttaacgactgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggagttc
tggacacgtttctttcagtcccattattttcacagggaccggctgaatactgggtcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcattg
ggagtgaaaaacccactacttgatttgacagctttggaagataaaccattagatgagggc
tatggcatttcctctgtgccatctacttctaattctaagtccataagagagaatagtaat
gctgccatcatcaagagatttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaatgagcaaaatggcgagcccagcagcattgatggaaattctgga
gatgcagattgctttcagccagcagtaaaaagggcaaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagac
aggtactatcatggtccaactccaatccagtcgctacagtatgcaacaagtcaggacatt
attaattcttttcaaagtattagacaagaaatggaagcttatacacccaaattaactcag
gttctctcaagcagtgctgccagtagtaccatcacagcactgtcacctggaggagcactg
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctgtatgtggctgttggggaacttctacggcacttctggtcctgctttccc
gttaatacgccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaaactctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaggagatgctccagacagcttacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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