Phocoena phocoena (harbor porpoise): 136126844
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Entry
136126844 CDS
T11058
Symbol
RIN1
Name
(RefSeq) ras and Rab interactor 1 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
136126844 (RIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136126844 (RIN1)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136126844 (RIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
RA
SH2
Motif
Other DBs
NCBI-GeneID:
136126844
NCBI-ProteinID:
XP_065738393
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All DBs
Position
8:complement(103833645..103839270)
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AA seq
786 aa
AA seq
DB search
MEAPGESGAGLLGAPSPTSFAPGHLEREKPAQDPLYDVPDAGGARAGGPQQPGRTVSLRE
RLLLTRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRQCQALCMRLPEASGPSFVSSH
YIQESPGGISLEGSELVFLDLVQLICAYCHTRDILLLPLQLPRAICQAATRKELEAISHL
GIEFWSSSLNTKAQPGPSEGPLLPRLKPRSPQELDQGTGAALCFFNPLFPGDLGPTKREK
FKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGTAPNQTERLPSRQLLRRESSVGYRVPAG
TGPSLPPLPSLQEVDCGSPSSSEEEGVPGSQGSPATSPRLGRRRPLLRSMSAAFCSLLAP
ERQVGRAAAALMQDRHTAVGQLVQDLLTQVRAGPETQELQGIREALSRARAMLSAELGPE
KLLSPERLECILEKSLHRSVLKPLRPILVVRLRRRLSANGSLGRLAEGLCLARAQGPRAF
GSHLSLPSPVEMEQVRQKLLQLLRAYSPSAQVKRLLQACKLLYTALRTQAGEGAGADEFL
PLLSLVLAQCDLPELLLEAEYMSELLEPALLTGEGGYYLTSLSASLVLLSGLNEAHTLPL
SPLQELQSSLSLWEQRRLPATHSFQHLLRVAYQDPSSGCTSKTLAVPPGASIAMLNKLCA
TKFRVTQPDTFSLFLYKEEDYHRLPPGALAHQLPTTGYLIYRRTEWRETQGTSPGAATEE
GSGRPEAEGREQEKGGRGDGDTKVKASPRDSRGESETMAEGGEDQARGGPAQPRGPEAEG
SQAAEE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctggagagtctggagcaggccttctcggagcccccagcccaaccagcttc
gcacctgggcacctggagagagaaaagccagcccaggacccgctgtacgatgtgcctgat
gccggcggggcacgagcaggtgggccccagcagcccgggcgcaccgtgagcctgcgggag
cgcctgctgcttacccggcccgtgtggctgcagctgcgggccaacgccgcggccgcgctg
cacgtgctgaggaccgagccccccgggacattcctggtacggaaatctaacactcgccag
tgccaagccttgtgcatgcggctgcccgaggccagcggcccctccttcgtctccagccac
tacatccaggagagccctgggggcatctccttggagggctcagagcttgtgttcctggac
ctggtccagctcatctgtgcctactgccacacccgggacattcttctcctcccgcttcag
ctccccagagccatctgccaggcagccacccgcaaggagctggaagccatctcccatctg
ggcattgagttctggagctcctccctcaacaccaaggctcagccaggcccatctgaaggc
ccactgctgcccaggctgaagccccggtccccacaagagctggaccagggcactggagct
gccttgtgtttcttcaaccccttgttcccaggggacctgggtcccaccaagcgggagaaa
ttcaagaggagctttaaagtgcgtgtgtccacagagacctccagccccctgtctccacca
gctgtgccgcctcccccagtcccagtgctgccagggacagcccccaaccagacagaaagg
ttgccctctcgccagctgctgcggagggagagctcagtggggtaccgtgtgccagcgggc
accggccccagcctcccgccactgccttccctccaggaggtggattgcggctcccccagc
agctcagaggaggagggggtgccagggtcccaggggagcccagcaacctcaccccgcctg
ggccgccggcggccgctgcttcggtccatgagcgctgccttctgctccctgctggcgccc
gagcggcaggtgggccgggcagccgcagcgctgatgcaggaccgacacacagccgtgggc
cagctggtgcaggacctactgacccaggtgcgggccggccctgagacccaggagctgcag
ggtatccgtgaggcgctgagccgggcccgagccatgctgagcgcggagctgggcccggag
aagctgctgtcaccagaaaggctggaatgcatcctggagaagtcgctgcatcgctccgtg
ctcaagcctctccggcccatcctggtggtccgcctgcggcgccgtctttctgccaacggc
tccctgggccgcctggctgaaggcctctgcctggcccgggcccagggccccagagccttc
gggtcccacttaagcctgccctccccagtagagatggaacaggtgcgccagaagctactg
cagctacttcgtgcctactcacccagcgcccaggtcaagcggcttctgcaggcctgcaag
ctgctctacacagccttgaggacccaggcaggggagggtgcaggggccgatgaattcctc
ccactgctgagcctcgtcctggcccagtgcgaccttcccgagctgctgctggaggccgag
tacatgtcagagctgctggagcctgccttgctcactggagagggcggctactacctgacc
agcctctcggccagcctggtcctgctgagtggcctcaacgaggcccacaccctcccgctg
agccccttgcaggagctgcagtcctccctcagcctctgggagcagcgccgcctgcccgcc
acccacagcttccagcacctcctccgcgtagcctatcaggaccccagcagtggctgtacc
tccaagacactagccgtgcccccaggggcctcgattgccatgctgaataagctctgtgcc
accaagttccgggtgacccagcctgacactttcagcctcttcctatacaaggaggaggac
taccaccgcctgccccccggagccctggcccaccagctccccaccaccggctacctcatc
tatcgccggacagagtggcgcgagacccagggcacctccccgggggctgccacagaggag
ggcagtgggaggccagaggcagagggcagggagcaggagaaagggggccggggagatggg
gacaccaaggtcaaagccagtcccagggacagcaggggagagtctgagacgatggccgag
gggggcgaggaccaggccaggggaggccctgctcagccaagggggccagaggctgaggga
agccaggcagcagaggagtag
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