Phocoena phocoena (harbor porpoise): 136126939
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Entry
136126939 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136126939
Ion channels [BR:
pphc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136126939
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
136126939
NCBI-ProteinID:
XP_065738458
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Position
8:60464662..60484730
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AA seq
942 aa
AA seq
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MEADPEVGVIFRKQRLLEAAERIHGLREAEEWRFGSEGGGQRTELAGEWVCGPGSEAEVA
LRGPLSRPQPKWTEIMNRKLKFPPPLLGAIXDLVXQLLELQVETTDGRPGGPLQNVEEAE
DHSWREALNLAIRLGHEAISDVLLASVKFDFRQIHEALLVAVDTNQPAVVRRLLAWLEWE
KGRKVDTRPFSLAFFDSSVDGPRFAPGVTSLTLACQKDLYEIAQLLMDQGHSIARPHPVS
CACLECSNTCCCDLLQFSLPRINTCHGIASCAHLSLASEDAMLAAFQLSCELRRLAHKEP
EFKHEYIALESLSQDYGFELLGMCQNQSKVTAVLDALGEDSKTEPEAEGLDQAFEESIPN
LARLRLAITYNQKWFVAPSICQQVLSSIWHGSLAGWRGSTSIWKLFVAFLIVLTTPFLCL
GHWLVPKSRLGRLMKIPVLKFLLHSASYLWFRIFLLGESLVMETQLGTFRGRSHSVXETS
LHMVWVAGFLWFECKEVWIEGLCSYLLDWWNILDTVVLSPYLAAFVLLAGLAYRRCRDAP
DGAACRYFTSAERSEWHTEDHEFLAEVLFXFTRLAYVLPAHESLGTLQISIGRMIDDMIR
FMFILTIILTAFLCSLNNVYVPYQETEWLGNFNETFQFLFWTMFGTEEHSVVDMPXFLVP
ELVGRALYGIFTIVLVIALLNMLIAMVTSSVQETEMHELRDAADVEWKFACSKLYLSYFR
EGLTLPVPFSILPSPKATFYLLRRIFLFICCXCSCCKTKKPDSPPIPTFANPGAGAGPGE
EERGSYWLHVIKALVQRYIETARREFEETRRKNLGNRLTELTKTVPRLQSEVAGVRRTLV
EGRLRRPPDGASILCRSITRVCNSFQNLGPPIPENPALTVPGIVGTQVSSETGLQDAGRA
RTPAPGESGPSSPAHVLGHREQESEGAGDVPQEEDLGTKEGS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgacccggaagtgggagtcattttccggaaacagcggcttcttgaggccgca
gaacgaattcacggacttcgggaggcggaagagtggcgcttcgggtcagaaggcggaggt
cagagaacagaattggcaggagaatgggtttgtggcccaggatctgaggcagaggtggct
cttcgaggcccattatcccggcctcagcctaagtggaccgagatcatgaacagaaagctg
aagttcccacctccgctgctgggtgccattnnggacctggtgtagcagctgctggagttg
caggttgagaccacagacggcaggccaggcgggcccctgcagaatgtggaggaggctgag
gaccactcctggagggaggcgctcaatctggccatccgcctgggccacgaggccatcagt
gatgtgctgttggccagtgtcaagttcgacttccggcagatccacgaggccctgctggtg
gctgtggacacaaaccagccggcagtggtgcgtcgcctgctggcctggctggaatgggag
aagggccgcaaggtggacaccaggcctttctcactggccttctttgactcatcagtcgat
ggcccccgctttgcccctggtgtcacctccctcaccctggcctgccagaaggacctgtat
gagatcgcccagctgctcatggaccagggccacagcatcgcccggccccaccctgtctcc
tgtgcctgcctcgagtgcagcaacacatgctgctgtgatctgctccagttctccctgccc
cgcatcaacacctgtcatggcattgccagctgtgcccacctctcactggccagtgaggac
gccatgctggctgccttccagctcagctgtgagctcaggcgccttgcccacaaggagcct
gagtttaagcatgagtacattgccctggagtcgctgagccaggactacggctttgaactg
ctgggcatgtgccagaaccagagcaaggtcactgcggtgctcgatgccttgggcgaggac
agcaagactgagcccgaggccgagggtctggaccaggcctttgaggaaagcatccccaac
ctggcgaggctgcgactggccatcacctacaaccagaagtggtttgtagcaccctccatc
tgccagcaggtcctgtcctccatctggcatgggagcctggctggctggcgtgggagcacc
agtatctggaagctctttgtcgccttcctcatcgtcctcaccacgcccttcctctgcctt
ggccactggctggtgcccaagtcccggctgggccgcctgatgaagatcccagtgctgaag
ttcctgctgcactcggcctcctatctgtggttccgcatcttcctgctgggagagtccctg
gtcatggagacacagctgggtaccttccgaggccgcagccacagtgtctaggagacttca
ctacacatggtttgggttgcaggcttcctgtggtttgagtgtaaggaagtgtggatcgag
ggcctgtgcagttacctcctggactggtggaacatcctggacacggtcgtcttgtccccg
tacctggcggccttcgtgcttctggccgggctggcctacaggcgctgccgggatgccccg
gacggggctgcctgccgctacttcacctcggctgagcggagtgagtggcacacggaagac
cacgagttcctggctgaggtgctctttngcttcacccgcctggcctacgtcctgccggcc
cacgagtcgctgggcaccctgcagatttccattggcaggatgatcgacgacatgatccgg
ttcatgttcattctcacgattatcctgaccgccttcctctgcagcctcaacaacgtctac
gtgccttaccaggagacagagtggctgggcaatttcaacgagaccttccagtttctgttc
tggacgatgtttggcacggaggagcacagtgtggttgacatgcccnngtttctggtgccg
gaactggtgggccgggccctctacggtatctttaccatcgtcctggtcattgcgctgctc
aacatgctcattgccatggtcaccagctccgttcaggagactgagatgcatgaactgagg
gacgctgctgacgtggagtggaagtttgcttgctccaagctctacctgtcctacttccga
gagggcctgacactgcccgtgcccttcagcatcctgccctcccccaaggctaccttctac
cttctcaggagaattttcctcttcatttgctgttgatgctcctgctgcaaaaccaagaag
ccagactctcccccaatccccacctttgccaatcctggggcaggggcagggcctggggag
gaagagcgtggatcctactggcttcatgtcatcaaggctctggtacagcgctacatagag
actgcgcggcgggagtttgaggagacccgtcggaaaaacctgggcaacagactgacagag
ctgaccaagacagtacctcgactgcaaagcgaggtagccggtgtgcggcggactctggtg
gagggaaggctgcgccggccaccggacggtgccagcatcctctgtcgctccatcacccga
gtgtgcaacagcttccagaacctgggccctcccatccctgagaacccagcgctgacagtg
ccagggattgtggggacccaggtgtcttcagaaactgggcttcaggacgcaggcagggcc
aggactccagcacctggagagtctggcccctcctccccagctcacgtgctagggcacagg
gagcaagaatcagagggggctggggacgtgccccaggaggaagacctgggaaccaaggag
gggtcctga
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