Phocoena phocoena (harbor porpoise): 136127086
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Entry
136127086 CDS
T11058
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04620
Toll-like receptor signaling pathway
pphc04621
NOD-like receptor signaling pathway
pphc04622
RIG-I-like receptor signaling pathway
pphc04623
Cytosolic DNA-sensing pathway
pphc05160
Hepatitis C
pphc05161
Hepatitis B
pphc05162
Measles
pphc05164
Influenza A
pphc05167
Kaposi sarcoma-associated herpesvirus infection
pphc05168
Herpes simplex virus 1 infection
pphc05169
Epstein-Barr virus infection
pphc05203
Viral carcinogenesis
pphc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136127086 (IRF7)
04621 NOD-like receptor signaling pathway
136127086 (IRF7)
04622 RIG-I-like receptor signaling pathway
136127086 (IRF7)
04623 Cytosolic DNA-sensing pathway
136127086 (IRF7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
136127086 (IRF7)
09172 Infectious disease: viral
05161 Hepatitis B
136127086 (IRF7)
05160 Hepatitis C
136127086 (IRF7)
05164 Influenza A
136127086 (IRF7)
05162 Measles
136127086 (IRF7)
05168 Herpes simplex virus 1 infection
136127086 (IRF7)
05167 Kaposi sarcoma-associated herpesvirus infection
136127086 (IRF7)
05169 Epstein-Barr virus infection
136127086 (IRF7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
136127086 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136127086 (IRF7)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
136127086 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
136127086
NCBI-ProteinID:
XP_065738572
LinkDB
All DBs
Position
8:109768116..109770633
Genome browser
AA seq
469 aa
AA seq
DB search
MAVAPDGGTPRVLFGDWLLGEVSSGRYEGLRWLDAARTRFRVPWKHFARKDLGEADSRIF
KAWAVARGRWPLRSSVGARPTAESALRASWKTNFRCALHCTRRFVMLQDNSGDPTDPHKV
YMVTPGPACGESPDIISQGEDKALEDAPPTRDGLAGLSPEPCAPSPAGDAGDLLIQALQQ
SCLEDHVLKAASGLPSSPDTGPPPAPWQPREAEPRTTASPSACTLMAGPVHVAGPTCSQL
GLHTLPSLGALDLTITYKGRTVLQAVVGRPSCVLLYGPPDGGGGASEHQRVAFPSPAQLP
DQKQLHYTEKLLQHVAPGLQLELRGLRLWARRLGKCKVYWEVGGPLGSASSSTPARLLPR
NCDTPIFDFSTFFQELGEFEACRRRGSPHYTIYLGFGQDLSVGRPKEKSLVLVKLEPWLC
RAYLEGVQREGASSLDSGSLSLCLSSCNSLYDELEHFLEHFLMEAEQPG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctcccgacggggggaccccgcgcgtgctcttcggagactggcttctgggc
gaggtcagcagtggccgctacgagggactacggtggctggacgcggcccgaacgcgcttc
cgcgtgccctggaagcactttgcgcggaaggacctgggagaggccgactcgcgcatcttc
aaggcctgggctgtggcccgcggcaggtggcctctccgcagcagcgtaggtgcccggccg
accgccgagagtgcgctccgagcttcctggaaaaccaacttccgctgcgcgctgcattgt
acgcggcgcttcgtgatgttgcaagacaactcgggggaccctaccgaccctcataaggtg
tacatggtcacccccgggccggcgtgcggagaaagcccagacattattagccagggggag
gacaaggcccttgaagatgccccacctacaagggatgggctggccgggctgagccctgag
ccctgtgccccaagcccagccggagatgctggggacctactgatccaggctctgcagcag
agctgcctggaggaccatgtgctgaaagctgcctcaggcctgccctcctctccagacacg
ggcccacccccagccccctggcagccccgagaggcggagccccgcaccacagcctccccc
agtgcctgcaccctgatggcagggcctgtgcacgtggctggtcccacctgctcacagctc
ggtctgcacacactgcccagcttgggggccctggacttgaccatcacgtacaagggccga
acagtgctgcaggcggtggtggggcgcccgagctgtgtgctcctgtatggcccccccgat
ggaggtggtggcgcttcagagcaccagcgagtagcctttcccagccccgcccagctgccc
gaccagaagcagctccactacacagagaagctgctgcagcacgtagcccccggcctgcag
ctggaactgcgcggtctcaggctgtgggcccggcgcctgggcaagtgtaaggtctattgg
gaggtgggagggcccctgggctcggccagctcctccacccccgcccgcctgctgccccgg
aactgcgacacccccatctttgacttcagcaccttcttccaagaactgggggagtttgag
gcctgccggcgccggggctcccctcactacaccatctatctgggctttgggcaggacctg
tcagtgggaaggcccaaggagaagagcctggtcctggtgaagttggagccatggctgtgc
cgggcatacctggagggcgtgcagcgcgaaggcgcgtcctctctggacagcggcagcctc
agcctctgcctttccagctgcaacagcctctatgatgaactggagcacttcctggagcac
ttcctgatggaggcggagcagcccggctag
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