Phocoena phocoena (harbor porpoise): 136127288
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Entry
136127288 CDS
T11058
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136127288 (PRDM11)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
136127288 (PRDM11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
DUF7822
Zn_ribbon_PRDM4
FOG1-like_PR
DUF4954
EpmC
Motif
Other DBs
NCBI-GeneID:
136127288
NCBI-ProteinID:
XP_065738854
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Position
8:95255618..95304549
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AA seq
1177 aa
AA seq
DB search
MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPRKLKGKR
DLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVV
KEASGENDVRCINEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETK
ANWMRYVVISREEREQNLLAFQHSECIYFRACRDIRPGERLRVWYSEDYMKRLHSMSQET
IHRNLARGEKKLQREKSEQALDNPEDLRGPLQLPVLRQGKSPYKRGFDEGDVHPQAKKKK
IDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQNDAYSQCAMTVSHGVQNVTRTQ
GEGDWKIPQGASKEAGPLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKK
VRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAASESMVSGPAIMEDDDQEVDSADE
SVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSS
RTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLA
LEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSI
ILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSALGIRL
QDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPC
LEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIK
DYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLVYFLLDVIAVLSRLAYVFQG
EYLLVSQVDDKLEEAIQEISRLADSPGEYLQEFEENFRESFNGISVKNLRVAEAKFQSIR
EKICQKTQVILAQRFDSRSRLFVKACQVFDLAAWPRNSEELMSYGKEDMVQIFDHLEAIP
TFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLIGHICKYKQRFPLLNKIIQVIKV
LPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEK
SGNSYTLSAEVLSRMSALEQKPVLQTVDHGSEFYPDI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacatgaaggagtgcttggcgcagaccaaggcagccgtgggggagatggtg
acggtggtgaagacagaggtctgctcaccgctccgcgaccaggagtatggccaaccctgc
tctaggagaccagacccctccgccatggaagtggagcccaggaaactgaaggggaagcgt
gacctcatcatgcccaaaagcttccagcaagtggacttctggttctgcgagtcctgccag
gagtactttgtggatgagtgcccgaaccatggtcccccggtgtttgtgtccgacacgccg
gtgcctgtgggcatcccagaccgggcggccctcaccatcccccagggcatggaggtggtc
aaggaagccagtggggagaatgacgtgcgttgcataaatgaggtcatccccaagggccac
atcttcggcccctatgaggggcagatctccacccaggacaaatcagctggcttcttctcg
tggctgattgtggacaagaacaaccgctacaagtccattgatgggtcagatgagactaaa
gccaactggatgaggtacgtggtcatctcccgggaggagagggagcagaacctgctggcg
ttccagcacagcgagtgcatctacttccgggcgtgccgggacatccggcccggggagcgg
ctgcgggtctggtacagcgaagactacatgaagcgcctgcacagcatgtcccaagagacc
atccaccgcaacctggccagaggagagaagaagttgcagagggagaagtctgagcaggct
ctggataacccagaagacctgaggggtcccctgcagctccccgtgttgagacagggcaaa
agtccctacaagcgtggctttgacgagggggacgtgcacccccaggccaagaagaagaaa
atcgacctcattttcaaggatgtgttggaggcctcactggaatctgcaaaggtagaagcc
caccagctggcactgagcacctcgctggtcatcaggaaggtccccaagtaccagaacgac
gcctacagtcagtgtgcaatgaccgtgtcacatggcgtgcagaacgtcacccggacccag
ggagaaggagactggaagatcccccaaggggcttccaaggaggcaggcccactggaggat
gaagaagaggagccttcgtcattcaaggccgacagtcccgccgaggcctcccttgcatcc
gaccctcacgagctgcccaccacctccttttgccctaactgtattcgcctaaagaagaag
gtccgggaactccaggccgaactagacatgcttaagtctggcacgcttcctgagcccccc
accttgccagcacaggtactggagctccccgaattctcagaccccgcagcctcagagagc
atggtctccggccctgccatcatggaggacgacgaccaggaggtcgattcggcagacgaa
tccgtctccaacgatatgatgacggccaccgatgagccctccaagatgtcgtcggccacc
gggcgccgaatccggcgcttcaagcaggagtggctgaagaaattctggttcctgcggtac
tccccgaccctcaacgagatgtggtgtcacgtctgccgccagtacacggtgcagtcctcc
cgcacctcggccttcatcatcggctccaagcagttcaagattcacaccatcaagttgcac
agtcagagcaacctgcacaagaagtgcctgcagctctacaagctccgcatgcaccccgag
aagacggaagagatgtgtcgcaacatgaccctgctcttcaacaccgcctaccacctggcc
ctggagggcaggccctacctggacttccggcccctggccgagctgctgcggaagtgcgag
ctcaaggtggtggaccagtacatgaacgagggagactgtcagatcctcatccatcacatc
gcccgggcgctgcgcgaagacctggtggagcgcatccgccagtcaccgtgcctcagcatc
atcctggatggacagagcgacgacctgctggctgacacggtggcggtctatgtccaatac
accagcagcgacgggcccccggccacggagttcctgtccctgcaggaactggggttctcc
agcacagagagctacctccaggcgcttgaccgggccttttccgccttgggcattcggctg
caggatgagaagcccaccgttggcttgggcatagacggggccaacgtcacagccagcctg
cgggccagcatgttcatgacgatccgcaagacgctgccctggctgctgtgcctgcccttc
atggtgcaccggccccacctggagatcctggatgccatcagtgggaaggagctcccctgc
ctggaggagctggagaacaacctgaagcagctgctgagtttctaccgttactcgccacgc
ctcatgtgcgagctgcggtccacggcgtccaccctctgcgaggagacggagttcctgggg
gacatccgggctgtgaggtggatcatcggagagcagaacgtcctcaatgccctcatcaag
gactacctggaggtggtggcccacctcaaggatgtcagcagccagacccagagggcggac
gcctcggccatcgcgctggccctgctgcagttcctcatggactaccagtccatcaagctc
gtctacttcctcctggacgtgatcgccgtgctgtcacgcctggcctacgtcttccagggc
gagtacctcctggtgtcccaggtggacgacaagctcgaggaggccatccaggagatcagc
cggctggccgactctccgggggagtacctgcaggagttcgaggagaacttccgggagagc
ttcaacgggatctccgtgaagaacctcagggtggccgaagccaagttccagtccatccgg
gagaagatctgccagaagacccaagtgatcctggctcagcggttcgattcccgcagccgg
ctcttcgtgaaggcctgccaggtgtttgacctggccgcctggcccaggaacagcgaggag
ctcatgagctacggcaaggaggacatggtgcagatctttgatcacctggaggccatcccc
accttttcccgggatgtctgcagggaagggctggacccccgggggagtctgctgatggag
tggcgggaactcaaggctgattactacaccaaaaacggcttcaaggacctgatcggccac
atttgcaaatacaagcagaggtttccgctcttgaacaagatcatccaggtcatcaaagtc
ctcccgacctccaccgcttgctgcgagaaaggccgaaacgccctgcagcgagtccgcaaa
aaccaccgctcccgcctgaccctggagcagctcagcgacctgttgaccatcgctgtcaac
ggccctccgatcgccaactttgatgccaagcgagccctggacagctggttcgaggagaag
tctggcaacagttacacactgtcggccgaggtcctcagccggatgtctgcgctggaacag
aagccagtgcttcagaccgtggaccacgggtcagagttttacccggatatttag
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