KEGG   Phocoena phocoena (harbor porpoise): 136127366
Entry
136127366         CDS       T11058                                 
Symbol
POLR2L
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03020  RNA polymerase
pphc03420  Nucleotide excision repair
pphc04623  Cytosolic DNA-sensing pathway
pphc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    136127366 (POLR2L)
  09124 Replication and repair
   03420 Nucleotide excision repair
    136127366 (POLR2L)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    136127366 (POLR2L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    136127366 (POLR2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pphc03021]
    136127366 (POLR2L)
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136127366 (POLR2L)
Transcription machinery [BR:pphc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     136127366 (POLR2L)
  RNA polymerase III system
   RNA polymerase III
     136127366 (POLR2L)
  RNA polymerase I system
   RNA polymerase I
     136127366 (POLR2L)
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      136127366 (POLR2L)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 136127366
NCBI-ProteinID: XP_065738955
LinkDB
Position
8:109603192..109604602
AA seq 67 aa
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL
NYAPLEK
NT seq 204 nt   +upstreamnt  +downstreamnt
atgatcatccctgtgcgctgcttcacgtgcggcaagatcgtcggtaacaagtgggaggcc
tacctcgggctgctgcaggccgagtacaccgagggggacgctctggacgcgctgggcctg
aagcgctactgctgccgccgcatgctgctggcccacgtggacctgatcgagaagctcctc
aactacgcacccctggagaagtga

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