Phocoena phocoena (harbor porpoise): 136127383
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Entry
136127383 CDS
T11058
Symbol
BCAN
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pphc00535
]
136127383 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
pphc00536
]
136127383 (BCAN)
04091 Lectins [BR:
pphc04091
]
136127383 (BCAN)
Proteoglycans [BR:
pphc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
136127383 (BCAN)
Glycosaminoglycan binding proteins [BR:
pphc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
136127383 (BCAN)
Lectins [BR:
pphc04091
]
C-Type lectins
Lecticans
136127383 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_2
Ig_2
ig
I-set
EGF_3
Izumo-Ig
Ig_3
Motif
Other DBs
NCBI-GeneID:
136127383
NCBI-ProteinID:
XP_065738981
LinkDB
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Position
1:113874559..113887564
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AA seq
909 aa
AA seq
DB search
MALPSLPLLATLALAWVPAALADALEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH
YLRPPPSRRAAQGSPRVKWTFLSGGREAEVLVARGLRVKVSEAYRFRVALPAYPASLTDV
SLVLSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACA
RIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV
DPDDLYDVYCYAEELNGELFLGAPPDKLTLEEARAYCQERGAKIATTGQLYAAWDGGLDR
CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSVQPS
AIPEATDLASDALEAIVTVTETLEELQLPQEAAESESRGAIYSIPIMEDGTGGSSTPEDP
AEAPRTLLEFETQSIVPPLGSSEEEGKVLEEEETHKDEEEREEEEEEEEEVEDEALWAWP
SELSSLDPEAPLPTELAPEESLSQASPPVRAVLKPDASPPPYGEPEAPRPPTVLGPPTEA
LPSPREGNLASPSPSTPVGAREIGKETGGPELSGVPRGESEETGSSEDAPSLLPATRVPE
GTRDRETPSEENSGRTVPAGTSVHAQPVLPTDSASHGGVAVAPSSGYCVPSPCHNGGTCL
EEEEGVRCLCLPGYGGDLCDVGLHFCSPGWDAFQGACYKHFSTRRSWEEAENKCRMYGAH
LASVSTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVSLLYENWNPGQPDSYFLSGE
NCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLRY
RCLEGLAQRNLPLIRCQENGRWEPPQISCVPRRPARALRPIKAPEGHPRRLLGSWKARLT
PPPNPAPGP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggccctaccatctctgcccctgctggcaaccctggctctggcctgggtccctgcggcc
ttagctgatgctctggaaggagacagctcagaggaccgggctttccgcgtgcgcatagcg
ggtgacgcgccgctgcagggcgtgctgggcggcgccctcaccatcccgtgccacgttcac
tacctgcggccgccgccaagccgccgggccgcgcagggctccccccgggtcaagtggacc
ttcctgtccggcggccgggaggccgaggtactagtggcgcgggggctacgcgtcaaggtg
agcgaggcctaccggttccgcgtggcactgcctgcctacccagcgtcactcaccgatgtc
tccctggtgctgagcgagctgcggcccaacgactcgggcatctaccgctgcgaggtccag
cacggcatcgacgacagcagcgacgctgtggaggtcaaggtcaaaggggtcgtctttctc
taccgagagggctctgcccgctatgctttctccttcgctggggcccaggaggcctgtgcc
cgcatcggagcccgaatcgccactccggagcagctctatgccgcctatcttgggggctat
gaacagtgtgatgctggctggttgtccgaccagaccgtgaggtatcccatccagactcca
cgagaggcctgttatggagacatggatggcttccctggggtccggaactatggagtggtg
gacccggatgacctctatgatgtctactgttatgctgaagaactaaatggagagctgttc
ctgggtgcccctccagacaagctgacattggaggaggcacgggcatactgccaggagcgg
ggtgctaagattgcaaccacaggccagctgtatgcagcctgggatggtggcctggaccgc
tgcagcccaggctggctggctgatggcagtgtgcgctaccccatcgtcacacccagccag
cgctgtggtgggggcctccctggtgtcaagactctcttcctcttccccaaccagaccggc
ttccccaacaagcacagccgcttcaatgtctactgcttccgagactctgtccagccctct
gccatccctgaggccactgacctggcctctgatgcactggaagccattgtcacagtgaca
gagaccctggaggaactgcagctgcctcaggaagctgcggagagcgagtcccggggagcc
atctactccattcccattatggaggatggaacaggtggaagctccactccagaagaccca
gcagaggcccctaggaccctcctagaatttgaaacccaatccattgtacctcccctgggg
tcctcagaagaggaaggcaaggtgttggaggaagaagagacacacaaggatgaagaagag
agagaagaggaagaagaagaagaggaggaggtggaggacgaggccctgtgggcctggccc
agtgagctcagcagcctggacccagaggcccctctccccactgagctggctccagaggag
tcactctcccaggcatccccaccagtgagggcagtcctgaagcctgatgcatcaccacct
ccctacggagagccagaggctcccaggcctccaacggtccttggaccacccacggaggcc
ctgccctctcccagggaagggaacctggcatccccatcaccttccactccggttggggca
agagagatagggaaggagactgggggtcctgagctgtctggggtccctcgaggagagagt
gaggagacagggagctccgaggatgccccttccctgcttccagccacacgggtccctgag
ggtaccagggaccgggagaccccttctgaagagaattctggaagaactgtcccagcaggg
acttcagtgcatgcccagccggtgctgcccactgacagtgccagccatggtggagtggcc
gtggccccctcatcaggttactgtgtccccagcccctgccacaatggtgggacgtgcttg
gaggaggaggagggggtccgctgcctatgtttgcctggctatgggggggacctgtgcgat
gttggcctccacttctgcagccccggctgggacgccttccagggcgcctgctacaagcac
ttttctacacgaaggagctgggaggaggcggagaacaagtgccggatgtacggcgcgcac
ctggccagcgtcagcacgccggaggaacaggacttcatcaacaatcgataccgggaatac
cagtggatcgggctcaatgacaggaccatcgaaggcgatttcctgtggtcagatggtgtc
tccctgctctatgagaactggaaccctgggcagccagacagctacttcctgtccggagag
aactgcgtggttatggtgtggcacgatcagggacaatggagtgatgtgccctgcaactac
cacctgtcctacacctgcaagatggggctggtgtcctgtggccccccaccagagctgccc
ctggctcaagtatttggccgtccacggctgcgctatgaagtagacacagtgcttcgttac
cggtgcctggagggcctggcccaacgcaacctaccactgatccgctgccaggagaatggt
cgctgggagcccccccagatctcctgtgtgccccgcaggcctgctcgagctctgcgccca
ataaaagccccagaaggacatccgaggaggctcctggggagctggaaggcacggttgaca
ccccctcccaatcccgctccaggtccctaa
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