Phocoena phocoena (harbor porpoise): 136127460
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Entry
136127460 CDS
T11058
Symbol
TUT1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136127460 (TUT1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136127460 (TUT1)
2.7.7.52 RNA uridylyltransferase
136127460 (TUT1)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136127460 (TUT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
zf-met
Zf-C2H2_ZNF451_C
TUTase
RRM_7
tRNA_NucTransf2
Motif
Other DBs
NCBI-GeneID:
136127460
NCBI-ProteinID:
XP_065739069
LinkDB
All DBs
Position
8:complement(100999203..101014127)
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AA seq
872 aa
AA seq
DB search
MAAVDSDVEPLPRGGFRCCLCHVTTANRPSLEAHLGGRKHRHLVELRAARKAQGLRSVFV
SGFPRDVGSTQLSEYFQAFGPVASVVMDKDKGVFAIVEMGDVGAREAVLSQPQHSLGGHR
LRVRPREQKEFQSPASKSPKGVAPDSYQLAKALAEAPDVEAQMAKLVGLRELSEAERQLR
SLVVALVQEVFTEFFPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLDEPQPAPKAAESPS
LDSALASPLDPQALACIPASPPDSQPPASPQDSEALDCEVPSSSLAPRTPDSALASETLA
SPQSLPPSSPLQEDQGEGDLGKAMELAEALKGEKVEGGAMLELVGSILRRCVPGVYRVQT
VPSARRPVVKFCHRPSGLHGDISLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGR
GLSGSGPLLNNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDAS
RLEPSTNKEPPSSLLVQFFSCISCWDLRGSLLSLREGQALPVAGGLPSNLWEGLRLGPMN
LQDPFDLSHNVAANVTSRVVGRLQNCCQAAASYCRSLQYQCRSSRGRDWGLLPLLQPSSP
SSLLSATPIPLPPAPFTQLTAALAQVLQQALGCHIEQGTKRLRSEGGGTGEPPQGGTSKR
LKLDGQKSCEGGQEEQQGRAGGHGEDGVEEMAIEAGESVQDWALRSPGQPGELAPMTGKH
LGTGEEGRSGLAALAEQGPGGPEAAREGSQAKAGKGALLSSVGWRCALCHRVWQGRRRAR
RRLQQIKEGGGAGAGTGAEWLATEAQVTRQLRGLSGTEQTPGAEPLLTFVVSVSQANQAL
TVTPLRDSQGLFPDLHHFLQVFLPQALRNLLK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggattcggatgtcgaaccgctgcctcgcgggggtttccgctgctgcctc
tgccacgtcactacggccaaccgacccagcctagaggcccacctgggaggccgaaagcac
cggcacctggtagaactacgagctgctcgaaaggcccagggacttcgaagcgtgtttgtc
agtggctttccccgggatgtgggttctactcagctctctgagtacttccaggcgtttgga
cctgtggccagtgttgtcatggacaaggacaagggagtgtttgccattgtggagatgggg
gacgtgggtgcccgggaagctgttctctcacagccccagcacagcttgggaggacatcgc
ctgagggtccggccacgggagcagaaagagttccagagcccagcctccaagtcccccaaa
ggagtggcccccgacagttaccagctggcaaaagcactagcggaggccccggacgtggag
gcacaaatggcgaagctcgtggggctgagggagctgtctgaggctgagcggcagcttcgg
agcctcgtggtggccctggtgcaggaggtcttcacagagttcttccctggctgtgtggtc
catcctttcggctcttccataaacagctttgacgtccatggctgtgatcttgacctcttc
ctggatctgggggacttggacgagccccagccagccccaaaggctgcagaatctccatcc
ctggactcagcccttgcatccccactggatcctcaagccctggcctgcatcccagcctcc
cctccagactcacagcctccagcttctccccaagactctgaagccctggactgtgaagtc
ccttcctcctccctggcaccccggactccagactctgctttggcctctgagaccctcgcc
tctccccagtccctgcctccatcctcgccactgcaggaggaccagggagagggggacctg
gggaaggccatggaactggcagaggccctgaagggggagaaagtagaagggggagccatg
ctggagctggtgggatccattcttcggcgctgtgtccctggagtgtaccgagtccaaact
gtgccatctgcccgacgccctgtggtcaagttctgccatcggccttcaggtctccacggt
gacatctccctcagtaaccggctggccctgcataactcccgcttcctgagcctctgctct
gagctggatgggcgagtacggccccttgtgtacactctgcgctgctgggctcagggtcga
gggctgtcagggagtggtccacttctcaataactacgccctgaccttgctcgtgatctat
ttccttcagaccagggaccctcctgtgttgcccactgtgtcccagctcacccagaaagca
ggtgagggcgaacaggtggaggttgatggctgggactgtagttttcccagggatgcctcg
agactggagcccagcaccaataaggagcccccgagttccctgctggtccagttcttctcc
tgcatctcttgttgggatcttcgtggctcactgctgtccctgcgggagggtcaggcactg
cctgtggcagggggcctgccctctaatctctgggagggtctgcgcctcggtcccatgaat
ctccaggacccctttgacctgagtcacaacgtggcagccaatgtgaccagccgggtggtc
gggcggctacagaactgctgccaagcagcagccagttactgccgaagcctccagtaccag
tgccgttcctcccggggtcgggactgggggctgcttccccttctgcagcccagctcccct
agctccctgctgtctgcaacacccatccccttaccccccgctcccttcacccagctcact
gctgccctggcccaggtgttacagcaggctttggggtgccatatagaacagggaaccaag
agactgcggtcagagggaggtggaactggggagcctccccagggagggacaagcaaaaga
ttgaaactagacggacagaaaagctgtgagggggggcaggaggaacagcagggacgtgca
gggggccacggtgaagatggggtggaagaaatggcgatagaggctggagagtcagtgcaa
gactgggccttgaggagccctgggcagccaggggagctggccccgatgaccggaaagcat
ctaggcactggagaagaggggcggtcaggcctcgcagcgctggctgagcaggggcccgga
ggacctgaggcagcccgagaagggtctcaggccaaggcagggaagggggcgttgctctcc
tcagtgggctggcgctgtgccttgtgccaccgagtgtggcaggggcggcggcgtgcccga
agacgcttgcagcaaatcaaggaaggaggtggagctggtgctggcacaggagcagagtgg
ctggcaactgaggctcaggtcacccggcagctgcgaggcctgagtggtactgaacagacg
ccaggggccgagccactcctgaccttcgtggtgtctgtctcccaggctaaccaggctctc
actgtgaccccactccgggattctcaaggcctgttccctgatctccatcatttcttacag
gttttcctccctcaagcacttcgaaacctgctcaagtga
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