Phocoena phocoena (harbor porpoise): 136127477
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Entry
136127477 CDS
T11058
Symbol
PRDM10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136127477 (PRDM10)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
136127477 (PRDM10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_6
SET
Zn_ribbon_PRDM4
Zf-C2H2_ZNF451
zf-Di19
DUF629
zf-C2H2_STOP2_C
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
136127477
NCBI-ProteinID:
XP_065739084
LinkDB
All DBs
Position
8:4993513..5047931
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AA seq
1150 aa
AA seq
DB search
MDSKDESSHVWPPAAEHEENAAQVHFVPDAGTVAQIVYTDDQVRPPQQVVYTADGASYAS
VDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHSQVLPSLEGVGGSDPL
ATLQSPMTRLEAKDEEDSEDSEEEEEDGGDTDLDDWEPDPPRPFDPHDLWCEECNNAHSS
VCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRES
ELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYG
HHVYYTTIKNVEPKQELKVWYAASYAEFVNRKIHDISEEERKVLREQEKNWPCYECNRRF
ISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKC
DDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQPALAVPQLPPEAQSSLEHETETHELHLQ
PQHEESVLPTQSTLTADDMRRAKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDK
LDQHLRFHGREGSCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLK
DHVAIHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHML
RHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDS
FTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSA
SKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYS
SKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMT
ELSQTLTTDYRTPQGDYQRIQYIPVSQSTSGLQQPQHIQLQVVQVAPATSPHQSQQSTVD
VAQLHDPQTYTQHAIQVQHIQVTEPPAPAAPASQVAGQPLSPSPQQSQQGLSPSQVAGSS
SQGQALQQQPQSTTVQHTYLPNAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQV
KAVTPGHYVLSESQSELEEKQASALTGGVQVQPTAHGDLDPQTTSQQPTQYIITTTTNGN
GSSEVHITKP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagatgaaagctcacacgtgtggcctccagctgcagagcacgaggagaat
gctgcacaggtgcattttgttccagacgctggaactgtggcccagattgtctacaccgat
gaccaggtccgtccaccacagcaggtggtgtacacagcagatggtgcctcttacgcgtca
gtggatggtccggagcacacgctggtctacatccatcccgtggaagctgcgcagacgctg
tttacagacccaggccaggtagcttatgtccaacaggatgctacagctcagcaggcctcg
ttgccggtgcacagccaggtgctaccttcacttgagggtgtgggtggctcggaccctttg
gcgaccctgcagagccccatgaccagactggaggccaaggacgaggaggactcagaggac
tcggaggaggaggaggaggacggcggagacacagacctggacgactgggagcctgacccc
cctcggcccttcgacccgcacgacctgtggtgtgaggagtgtaataacgcacactcgtcc
gtgtgcccgaagcatggccccctgcatccgatccccaaccggccggtgctcactcgggcg
cgggccagcctccccctggtgctgtacatcgacaggttcctgggcggtgtgttctccaaa
aggcgtatccccaagcgcacccagttcggccccgtggaggggccactggtcagggagtcg
gagctgaaggactgttacatccacctcaaggtttctcttgataaaggtgacagaaaagac
agggatttgcatgaagacctgtggtttgagttgtctgacgagaccctctgtaactggatg
atgttcgtgcgcccggcccagaatcacctggagcagaacctggtggcttatcagtatggc
caccacgtgtactacacaacaatcaagaacgtggagcccaagcaggagcttaaggtgtgg
tatgctgcttcctatgccgagtttgtgaaccggaagattcatgacatttccgaggaagaa
aggaaagttcttcgagagcaagagaagaattggccctgctacgaatgtaaccgccgattt
ataagctcagagcagctgcagcagcatctcaattcgcatgatgagaaactggatgtgttt
agcagaacaagaggcagaggaagggggcgaggcaagaggcggtttggcccaggtcggcgg
ccgggacgccctcccaaatttatccgcttggaaataaccagtgaaaatggggaaaagtgt
gatgatgggacacaggacttgctgcattttcccaccaaggagcagttcgatgaggctgaa
cctgcaactctgaatgggctggatcaaccagagcagcccgcgctcgcagtccctcagctg
ccaccggaagcccagtcttctctggagcacgagacggaaacgcacgagctgcacctgcag
ccccagcacgaggagagcgtgctgcccacccagagcaccctgacggccgacgacatgcgc
agggccaagcgcatccggttggagctgcagaatgcagctcttcagcatctgtttattcgg
aagtccttccggccttttaaatgtttgcagtgtgggaaggccttccgtgaaaaggacaaa
ctggaccaacacttgcgcttccatgggcgggaggggagctgcccattgacctgtgacctc
tgtaacaagggcttcatcagcagtgcgtccttggagagccacatgaagctccactcggac
cagaagacttactcttgcattttttgcccagaatcctttgaccgccttgatttgttgaaa
gatcacgtggccattcatatcagtgatggctacttcacctgcccaacttgtaagaaacgg
ttcccagattttatccaggtgaaaaaacacgtgcgaagcttccactcggaaaagatctac
cagtgtacggagtgcgacaaggccttctgccgccccgacaagctgcggctgcatatgctc
cggcactcagaccgtaaggacttcctgtgttctacgtgtgggaagcagtttaagcgaaaa
gacaaactacgggaacacatgcagaggatgcacaaccctgagagggaggccaagaaagct
gaccgcatcagccgctccaagacgttcaagccgcgcatcacgtccaccgactacgacagc
ttcacgttcaagtgccgcctgtgcatgatgggcttccggagacgaggcatgctggtaaat
cacttatcaaagaggcacccagacatgaagatagaagaggtgccagagttaactctaccc
atcataaagcccaaccgtgactacttttgtcagtattgtgataaggtttataaaagtgcc
agcaagcgaaaagcccacattctgaagaaccatcctggggctgagctcccaccaagcatt
cggaaacttcgtcccgctggccctggagaaccagaccccatgctgagcacccacacccag
ctcacgggcactatagctaccccgcccgtgtgctgccctcactgctccaaacagtacagc
agcaagaccaagatggtacagcacattcgaaagaagcatccagagtacgcccagctaccc
aacaccatacacacacctctgacaacagccgtgatcagtgcggctccagctgttttaact
acagacagtgctaccggagagactgtggtgacaacagacttgctaacccaggctatgaca
gaactgtcccagaccttgacgacggattaccgaacgccgcaaggggactaccagagaatc
cagtacattcctgtgtcgcagtctacatctggtctacagcagcctcagcacatacagctt
caagtggtgcaggtggccccggccacttcccctcaccagtcccagcagtccacggtggac
gtcgcccagctccacgaccctcagacctacacacagcatgccatccaggtgcaacacatc
caggtcacggagccccccgccccggccgcgcccgcctcccaggtggcagggcagccgctg
agcccctccccgcagcagtctcagcaggggctcagcccctcccaggtcgcaggcagctcc
tcgcagggccaggccctccagcagcagccccagagcaccacggtccagcacacgtacctc
cccaatgcctggaattccttccgcggctactcatcggagattcagatgatgacgctcccc
ccgggtcagtttgtgattacagacagtggcgtggcaactccggtcaccactggccaagtg
aaggcggtgactccaggtcattatgtgctatcagaaagtcaatcagaattggaggaaaag
caagcttctgctctcactggtggagtccaggttcagccaactgcacatggtgacttggac
ccccagaccaccagccaacagcccacccagtacatcatcacaaccaccaccaacgggaat
gggagcagcgaagtgcacatcactaaaccttaa
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