Phocoena phocoena (harbor porpoise): 136127614
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Entry
136127614 CDS
T11058
Symbol
PSMC3
Name
(RefSeq) 26S proteasome regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03050
Proteasome
pphc05010
Alzheimer disease
pphc05012
Parkinson disease
pphc05014
Amyotrophic lateral sclerosis
pphc05016
Huntington disease
pphc05017
Spinocerebellar ataxia
pphc05020
Prion disease
pphc05022
Pathways of neurodegeneration - multiple diseases
pphc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
136127614 (PSMC3)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
136127614 (PSMC3)
09164 Neurodegenerative disease
05010 Alzheimer disease
136127614 (PSMC3)
05012 Parkinson disease
136127614 (PSMC3)
05014 Amyotrophic lateral sclerosis
136127614 (PSMC3)
05016 Huntington disease
136127614 (PSMC3)
05017 Spinocerebellar ataxia
136127614 (PSMC3)
05020 Prion disease
136127614 (PSMC3)
05022 Pathways of neurodegeneration - multiple diseases
136127614 (PSMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pphc03051
]
136127614 (PSMC3)
Proteasome [BR:
pphc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
136127614 (PSMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
AAA_11
Mg_chelatase
AAA_33
PhoH
DUF5827
IstB_IS21
AAA_24
AAA_7
Sigma54_activat
AAA_28
ATPase
AAA_14
RNA_helicase
Defensin
Motif
Other DBs
NCBI-GeneID:
136127614
NCBI-ProteinID:
XP_065739287
LinkDB
All DBs
Position
8:complement(97191564..97199543)
Genome browser
AA seq
442 aa
AA seq
DB search
MEQMNLLPKLESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS
EVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQR
KGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV
DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA
RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD
SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP
NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH
EDYMEGILEVQAKKKANLQYYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatgaatctgctgccgaaactcgagagtccagtgactcggcaggagaagatg
gcgaccgtgtgggatgaggctgagcaagatggaatcggggaggaggtactcaagatgtcc
acagaagagatcatccagcgcacgcggctgctggacagtgaaatcaagatcatgaagagc
gaagtgttgcgagtcacccacgagctccaagccatgaaggacaaaatcaaagagaacagt
gagaaaatcaaagtgaacaagactctgccgtacctggtctccaacgtcatcgagcttcta
gatgttgatcccaacgatcaagaggaagatggtgccaatattgacctggattcccagagg
aagggcaagtgtgcagtgatcaaaacctctacacgacagacatacttcctgcctgtgatt
gggttggtggatgctgaaaagctgaagccaggagacttggtgggtgtgaacaaagactcc
tatctgatcctggagaccctgcccacagagtacgactcgcgggtgaaggccatggaggtg
gacgagaggcccacagagcaatacagtgacatcgggggcctggataagcagattcaggag
ctggtggaggccatcgtcctgccgatgaaccacaaggagaagtttgagaacttagggatc
cagcctccaaagggggtgctgatgtacgggcccccaggaacggggaagaccctgctggcc
cgggcctgtgctgcacagaccaaggccaccttcctgaagctggctggcccccagctggtg
cagatgttcattggggatggtgccaagctagtccgggatgcctttgccctggccaaggag
aaagctccatccatcatcttcatcgatgagctggatgccatcggcaccaagcgctttgac
agcgagaaggccggggaccgggaggtacagaggacgatgctggagcttctgaaccagctg
gacgggttccagccgaacacccaagtgaaggtaattgcagccactaacagggtggacatc
ctggaccctgccctgctccgctcaggccgcctggaccgcaagatcgagttcccgatgccc
aacgaggaggcccgggccagaatcatgcagatccactcccgaaagatgaatgtcagccct
gacgtgaactacgaggagctggcccgctgtacagacgacttcaacggggcccagtgcaag
gccgtgtgtgtggaggcgggcatgatcgcgctgcgcaggggcgccacagagctcacccac
gaggactacatggagggcatcctggaggtacaggccaagaagaaagccaacctgcagtac
tacgcctaa
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