Phocoena phocoena (harbor porpoise): 136127680
Help
Entry
136127680 CDS
T11058
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04514
Cell adhesion molecule (CAM) interaction
pphc04517
IgSF CAM signaling
pphc04530
Tight junction
pphc04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136127680 (F11R)
04517 IgSF CAM signaling
136127680 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136127680 (F11R)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
136127680 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136127680 (F11R)
04090 CD molecules [BR:
pphc04090
]
136127680 (F11R)
Cell adhesion molecules [BR:
pphc04515
]
Immunoglobulin superfamily
CTX family
136127680 (F11R)
CD molecules [BR:
pphc04090
]
Proteins
136127680 (F11R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C1-set
C2-set_2
Ig_VEGFR-1-like_5th
V-set_CD47
Ig_6
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
Ig_C17orf99
Invasin_D3
DUF5626
Motif
Other DBs
NCBI-GeneID:
136127680
NCBI-ProteinID:
XP_065739407
LinkDB
All DBs
Position
1:complement(117107255..117128034)
Genome browser
AA seq
299 aa
AA seq
DB search
MLGTKAKVGRKQLLLFTSMILCSLALGRGAVQTSEPVVQVAENKPAKLSCSYSGFSSPRV
EWKFAHGDITSLVCYNNKITASYEDRVTFSDSGITFHSVTRKDTGMYTCMVSEEGGNTYG
EVTVQLIVLVPPSKPTISVPASATIGTRVVLTCSETDGSPPSEYFWFKDGVLMPTEPKNN
RAFSNSSYSLNHKTGELIFDPVSASDAGDYTCEAQNGYGSPMKSDTVHMDAVELNVGGIV
AAVLVTLILLGVLIFGIWFAYNRGYFDRAKKGTSNKKVIYSQPTARRDGEFRQTSSFLV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttggggacgaaggcgaaagtcgggaggaaacagttgcttctcttcacatcgatgatc
ctgtgctcactggcattgggcaggggtgcagtgcaaacttctgaaccagtagtccaagtt
gctgagaataaacctgccaagttgtcctgctcctactccggcttctcctctccccgcgtg
gagtggaagtttgcccatggcgacatcaccagcctcgtttgctataacaacaagatcaca
gcttcctatgaggaccgagttactttttcggacagtggcatcaccttccattctgtgacc
cggaaagacacggggatgtacacttgtatggtctctgaagaaggcggcaacacctatggg
gaagtcactgtccagctcattgtgcttgtgcctccatccaagcctacaatcagtgtcccc
gcctctgctaccatcgggacccgagtggtgctgacctgctcagagacagacggttcccca
ccttctgaatacttttggttcaaggatggggtactgatgcctacggaacccaagaacaac
cgtgctttcagcaactcttcctatagcctgaaccataagacaggggagctgatctttgac
cccgtgtcggcctctgatgctggagattatacttgtgaggcgcagaatgggtatgggtca
cccatgaagtcagacactgtgcacatggatgctgtggagctgaatgtagggggcatcgtg
gcagctgtccttgtaacactcattctccttggagtcttgatttttggcatctggttcgcc
tataaccgaggctactttgacagagcaaagaaagggacctcgaataagaaggtgatttac
agccagcccactgctcgaagagatggggaattcagacagacctcatcattcttggtgtga
DBGET
integrated database retrieval system