Phocoena phocoena (harbor porpoise): 136127800
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Entry
136127800 CDS
T11058
Symbol
SND1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
136127800 (SND1)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
136127800
NCBI-ProteinID:
XP_065739462
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Position
9:81919707..82339229
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AA seq
910 aa
AA seq
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MASSAQSGGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLA
RRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNG
ENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTLRDLKYTI
ENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSET
PEPFAAEAKFFTESRLLQRDVQIILESCHNQNVLGTILHPNGNITELLLKEGFARCVDWS
IAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKL
NSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVD
YIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL
AAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL
KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVEG
MDKAGNFIGWLHIDSANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAR
YEEQPVEEVAPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRSDISS
HPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKVHVFYIDYGNREILPSSRLGTL
PPAFSTRVLPAQATEYAFAFIQVPQDEDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHV
TLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRA
DDADEFGYSR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccgcgcagagcggcggctcctccgggggacccgcggtccccaccgtgcag
cggggcatcgtcaagatggtcctctcagggtgtgccatcattgtgcgcgggcagcctcgt
ggtgggcctcctccagagaggcagatcaaccttagcaacattcgcgctggaaaccttgcc
cgcagggcagctgccacacaacctgatgcaaaagacaccccggatgagccctgggcattt
cctgctcgagagttccttcggaagaagctgattgggaaggaagtctgcttcacgatagaa
aacaagactccccaggggcgagagtatggcatgatctaccttggaaaagataccaatggg
gaaaacattgcagaatctctggttgcagagggcttggccacccggagagaaggcatgaga
gcaaacaatcctgagcagaaccggctttcggagtgtgaggagcaagcaaaagcagctaag
aaaggaatgtggagtgaggggaatggttcacatactctccgggacctcaagtataccatt
gagaacccaaggcactttgtggactcacaccaccagaagcctgttaatgctatcatcgag
cacgtgcgggacggcagtgtggtcagggccctgctcctgcccgactactacctggtcacg
gtcatgctgtcagggatcaagtgcccaacttttcgacgggaagcagacggcagtgaaaca
ccagaaccttttgccgcagaagccaaatttttcaccgagtctcgactgcttcagagagac
gtccagatcattctggagagctgccacaaccagaacgttctgggtaccatccttcatcca
aatggcaacatcacagagctcctcctgaaggaaggttttgcccgctgtgtggattggtcg
attgcagtttacacacggggtgcagaaaagctgagggcggctgagaggtttgccaaggag
cgcaggctgagaatatggagagactatgtggctcccactgctaatttggaccaaaaggac
aagcagtttgttgccaaggtgatgcaggtgctgaatgccgatgccattgttgtgaagctg
aactctggggactacaagaccatccacttgtccagcatccgaccaccgaggctggagggg
gagaatacacaggataagaacaagaaactgcgtcccctctatgacattccctatatgttt
gaagcccgggaatttctgcgaaagaagcttattgggaaaaaggtcaacgtgactgtggac
tacattagaccggccagcccagccacagagacggtgcctgccttttcagagcgtacctgt
gccaccgtcaccattggaggaataaacattgccgaggcccttgtcagcaaaggtctggcc
acggtgatcaggtaccggcaggatgacgaccagcggtcctctcactatgatgaactgctc
gccgccgaggccagggctattaagaatggtaaaggattgcatagcaagaaggaagtgcct
atccaccgtgtcgcagacatatctggggacacccaaaaagcaaagcagtttctgcccttc
cttcagcgggcaggtcgttctgaagccgtggtggagtatgtgttcagtgggtctcgtctc
aagctgtatttgccaaaggaaacttgccttatcaccttcttgcttgcaggcatcgaatgc
ccccgaggagcccgaaacctcccaggcttggtgcaggagggagagccgttcagtgaggaa
gcgacgcttttcaccaaggagctggtgctgcagcgagaggtggaggtggaggtggagggc
atggacaaggctggcaacttcatcggctggctgcacatcgacagcgccaacctgtccgtc
ctgctggtggagcacgcgctctccaaggtccacttcaccgctgagcgcagctcctactac
aagtctctgctgtctgccgaggaggccgccaagcagaagaaagagaaggtctgggcccgc
tatgaggagcagcccgtggaggaggtggcgcccgtgctggaggagaaggagcgctcggcc
agctacaagccagtgtttgtgaccgagatcaccgacgacctgcacttctacgtgcaggat
gtggagacgggcacccagttggagaagctgatggagaacatgcgcagtgacatctccagc
caccctcccgtcgagggctcctatgccccacgccggggcgaattctgcattgccaaattt
gtagacggagaatggtaccgcgcccgagtggagaaagtcgagtctcctgccaaagtacac
gtcttctacatcgactacggcaacagagagatcctgccgtcctcccgcttgggcaccctg
ccacctgccttcagcactcgcgtgctgccagctcaagccacggagtatgccttcgccttc
atccaggtgccccaagacgaggatgctcgaacagacgccgtggacagcgtggtgcgggac
atccagaacacgcagtgcctgctcaacgtggaacacctgagcgccggctgtccccacgtc
accttgcagtttgccgactccaagggggacgtggggctgggcttggtgaaggagggattg
gtcatggtggaggtgcgcaaggagaaacagttccagaaggtgatcacagaatacctgaac
gcccaggagtcagccaagagcgccaggctgaacctgtggcgctacggagacttccgagcc
gatgacgcagatgagtttggctacagccgctaa
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