Phocoena phocoena (harbor porpoise): 136127873
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Entry
136127873 CDS
T11058
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04621
NOD-like receptor signaling pathway
pphc05132
Salmonella infection
pphc05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
136127873 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136127873 (NOD1)
05133 Pertussis
136127873 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pphc04054
]
136127873 (NOD1)
Pattern recognition receptors [BR:
pphc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
136127873 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
WHD_NOD2
LRR_4
RsgA_GTPase
AAA_16
AAA_22
ABC_tran
AAA_18
PIF1
Motif
Other DBs
NCBI-GeneID:
136127873
NCBI-ProteinID:
XP_065739608
LinkDB
All DBs
Position
9:complement(60086539..60131341)
Genome browser
AA seq
953 aa
AA seq
DB search
MEKQGRSEMEIIRSESHSYIRLLKVNREHLVTHVRNTQCLLDNLLQNEYFSAEDVEIVCA
CPTQPDKVRRILDLVQSKGEEVSEFFLYVLQRLTDAYVDLRPWLSEISFSPSQLIQSKAV
VNTDPVSRYSQKLRQQLGRDSKFVLCYAQKEELLLEEMYTDTVVELVDFGNESLGSLGSL
ACLLDPSTGVLNEQGETIFIFGDAGVGKSMLLQRLQSLWAAGQLDAELRFFFHFRCRTFS
CFKESASLCLQDLLFKHYCYPEQDPEEVFAFLLRFPHTALFTFDGLDELHSDFDLSGEPD
TSSPWEPAHPLVLLANLLSGKLLKGAHKLLTARTGVEIPRHLLWKKVLLRGFSPSHLRAY
AGRMFPERAVRQRLLDQLEANANLFSLCAVPLFCWIIFRCFQHFYDTFDGFLQLPDRTVT
LTDVFLLVTEVHLNRTQPTSLVQQNTRSQTETFRAGRGTLRSLGQVAHRGMEKSFFVFSQ
EEVQASEVQEGDLQLGFLRAVPELGLGGDQQSYEFFHLTLQAFFAAFFLVVDEKVGTREL
LCFFREWAPHGAAAAASCYPRFLPIQCLRGRGLAGEDPFKNKDHFHFTNLFLCGLLSKDK
QKLLRHLVPAATLRRKRRALWAYLFASLRSHLKHLPRVRSGRFSQVQAMPTFIWMLRCIY
ETQSEKVGQLAARGICANYLKLTFCNVCSADCSALSFVLHHFRKRLALDLDNNNLNDYGV
RELQPCFSRLTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARIL
DECTGLTHLKLGKNKITSEGGKCLALAVKNSKSIFEVGMWGNQIGDEGARAFAEALRNHP
SLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKH
LWLIQNQITAKGIAQLADALQKNTGIMEICLNGNLIKPEEAKVFEDEKRIVCF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagggccgcagtgagatggaaataatccggtcagagtcgcactcctacatc
agattgttgaaggtcaaccgggagcatctggtcactcacgtccgcaacactcagtgtctg
ctggacaacttgttgcagaatgagtacttctccgccgaagacgtggagatcgtgtgtgcc
tgccccacgcagcccgacaaggtccgcagaattctggacctggtgcagagcaagggcgag
gaggtgtccgagttcttcctctatgtgctacagcgactcacagacgcttacgtggacctc
aggccttggctgtcggagatcagcttctccccttcccagctcattcagagcaaagctgtt
gtcaacaccgatccagtgagcagatacagccagaagctgcgacagcaactgggccgcgac
tccaagttcgtcctgtgctacgcccagaaggaggagctgctgctggaggagatgtacacg
gacactgtcgtggagctggtcgacttcggcaacgagagcctgggcagcctgggcagcctg
gcctgcctcctggacccctccacgggcgtcctcaacgagcagggcgagaccatcttcatc
ttcggcgacgcgggcgtgggcaagtccatgctgctgcagcggctgcagagcctctgggcc
gcgggccagctggacgctgagctcaggttcttcttccacttccgctgccgcaccttcagc
tgcttcaaggagagcgcctcgctgtgcctgcaggacctgctcttcaagcactactgctac
ccggagcaggaccccgaggaggtgttcgccttcctgctgcgcttcccgcacacggccctc
ttcaccttcgacggcctggacgagcttcactcggacttcgacctgagcggcgagcccgac
acctcctccccctgggagcccgcccaccccctggtcctgctggccaacctgctcagcggg
aagctgctcaagggggcgcacaagctgctcacggcccgcacgggcgtcgagatcccgcgg
catctcctctggaagaaggtgctcctgcgcggcttctcccccagccacctgcgcgcctac
gctgggaggatgttccccgagcgtgccgtgcgccagcgcctgctggatcagctggaagcc
aacgccaacctcttcagcctgtgcgctgtgcccctcttctgctggatcatcttccggtgc
ttccagcacttctacgacaccttcgacggcttcctgcagctgcccgaccgcacggtgacg
ctgaccgacgtcttcctgctggtcaccgaggtccacctgaacaggacgcagcccaccagc
ctggtgcagcagaacacgcggagccagacggagacctttcgcgccggccggggcaccctg
cgctcgctgggccaggtggctcaccggggcatggagaagagcttcttcgtcttcagccag
gaggaggtgcaggcgtccgaggtgcaggagggggacctgcagctgggtttcctgcgggcc
gtgccggagctgggcctcggaggggaccagcagtcctatgagttcttccacctcaccctc
caggccttctttgctgccttttttctggtggtggacgagaaggtgggcactcgggagctg
ctctgcttcttccgggagtgggctcctcacggggcggcagcagctgcgtcctgctatccc
cgcttcctacccatccagtgcctgaggggccgtggcctggccggggaagacccctttaag
aacaaggatcactttcatttcaccaacctcttcctgtgcgggctgctatccaaagacaaa
cagaaactcctgcgacacctggtgcctgccgccaccctgcggagaaagcgcagggccctg
tgggcttacctgttcgccagcctgcgctcccacctgaagcacctgccccgagttcggtct
gggagattcagccaggtgcaggccatgcccaccttcatctggatgttgcgctgcatctat
gagacgcagagcgagaaggtggggcagctggcggccaggggcatctgcgccaactacctc
aagctgaccttctgcaacgtctgctcggctgactgcagcgccctctccttcgtcctgcac
cacttccgcaagcgcctggcgctcgacctggacaacaacaatctcaacgactatggtgtg
cgggaactgcagccctgcttcagccgcctcaccgtcatcagactcagtgtgaaccagatc
accgacagtggggtgaaggtgctatgtgaagagctgaccaaatacaaaattctgacattt
ttaggcttatacaacaaccaaatcaccgatgtcggagccaggtacatcgccagaatcctg
gatgagtgcacaggcctcacgcacctgaaactgggaaaaaacaaaataacaagcgaagga
ggaaagtgtctcgccctggctgtgaagaacagcaaatccatctttgaagttgggatgtgg
ggcaatcaaatcggtgatgaaggagcaagggccttcgcagaggctctgaggaaccacccg
agcttgactaacttgagtcttgcattcaatggcatttctacagaaggaggaaagagcctc
gcgtgggccctgcagcagaatgcgtctctgagaatattctggctcaccaaaaatgaactt
gatgatgaagtggcagagagcttggcagagatgttgaaagtcaaccagacgttgaaacat
ttatggcttatccagaaccagattacagccaaggggattgcccagttggcagatgcatta
cagaagaacactggcataatggagatttgcttaaatggaaacttgataaagccagaggag
gccaaagtctttgaagacgagaagcggattgtctgtttctga
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