Phocoena phocoena (harbor porpoise): 136127875
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Entry
136127875 CDS
T11058
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pphc01001
]
136127875 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136127875 (TRIM24)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136127875 (TRIM24)
Protein kinases [BR:
pphc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
136127875 (TRIM24)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
136127875 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
136127875
NCBI-ProteinID:
XP_065739612
LinkDB
All DBs
Position
9:91042227..91131917
Genome browser
AA seq
1050 aa
AA seq
DB search
MEVAVEKAATAAAAASAAAAGGPSAPPSGENEAESRQGPDSERGGEAARLNLLDTCAVCH
QNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGSSPFAT
QVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECV
EWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDK
LTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRIIEVNQ
NQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVM
HFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINL
GSLVIEDKESQPQMPKQNPVTEQNSQPPGGLSSNQLSKFPTQISLAQLRLQHMQQQVMAQ
RQQVQRRPAPVGLPNPRMQGPIQQPSISHQQPPPRLINFQNHSPKPNGPVLPPHPQQLRY
PPNQSTPRQAIKPNPLQMAFLAQQAIKQWQVSSGQATPSAANSTSSTPSSPTITSAAGYD
GKTFGSPMIDLSSPVGGPYNLPSLPDIDCSSTIMLDNIVRKDTSTDHGQPRPPSNRTVQS
PNSSVPSPGLTGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI
RIKQENSGPPENYDFPVVIVKQESDEESRAQNTNYPRSILTSLLLNSSQSSASEESVLRS
DAPDSTGDQPGLNQENSSNGKSEWLDASQKSPLHVGETRKEDDPNEDWCAVCQNGGELLC
CEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPEVEYDCDAPIHNSEKKKTEGLIKL
TPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYT
KPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRNESE
DNKFSDDSDDDFVQPRKKRLKSIEERQLLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtagagaaggcggcgacggcggccgcggcggcttcggcggcggccgcc
ggggggccctcggctccgccgagcggggagaacgaggccgagagtcggcagggccccgac
tcggagcgcggaggcgaggcggcccggctcaacctgttggacacttgcgccgtgtgccac
cagaacatccagagccgggcgcccaagctgctgccctgcctgcactccttctgccagcgc
tgcctgcccgcgccccagcgctacctcatgctgcccgcccccatgctgggctcggccgag
accccgccgcccgtccccgcccccggctcgccggtcagcggctcctcgccgttcgctacc
caagtgggagtcattcgatgtccagtttgcagccaagaatgtgccgagagacacatcata
gataatttttttgtgaaggacactactgaggttcccagcagtacagtagaaaagtctaat
caggtatgtacaagctgtgaggacaatgcagaagctaatgggttttgtgtagagtgtgtt
gaatggctctgcaagacatgcatcagagctcatcaaagggtgaaattcacaaaagaccac
actgtgagacagaaagaggaagtatctccagaggcagttggtgtgaccagtcagcgacca
gtgttttgtccttttcataagaaggagcagctgaaactttactgtgaaacatgtgacaaa
ctgacatgtcgggactgccagttattagaacataaagagcacagatatcaatttatagaa
gaagcttttcagaaccagaaagtgatcatagatacactaatcaccaaactgatggaaaaa
acaaaatacataaaattcacaggaaatcagatccaaaacaggataattgaagtaaatcaa
aatcagaagcaggtggaacaggatattaaagttgccatatttacattgatggtagaaata
aataaaaaaggaaaagctctactgcatcagcttgagagtcttgcaaaagatcatcggatg
aaacttatgcaacagcagcaggaagtggctggactttctaaacagttggaacatgtcatg
catttttctaaatgggcagtttccagtggcagcagtacagcattactttatagcaagcga
ctgattacataccggttacggcacctccttcgagcaaggtgtgatgcttccccagtgacc
aacaataccatccaatttcactgtgatcctagtttctgggctcaaaatattatcaattta
ggttctttagtaatcgaagataaagagagtcaaccacaaatgcctaagcagaatcctgtc
acggaacagaattcacagccaccaggtggtttatcttcaaaccagttatccaagtttcca
acacagatcagcctagctcaattacgactccagcatatgcagcaacaggtaatggctcag
aggcaacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatgcagggg
cccatccagcaaccttccatctctcatcagcaacctcctccacgtttgataaattttcag
aatcacagccccaaacccaatggaccagttcttcctcctcatcctcaacagctaagatat
ccaccaaaccagagtacgccacgacaagcaataaagcccaaccccctgcagatggctttc
ctggctcaacaagccataaaacagtggcaggtcagcagtgggcaggccaccccatcagct
gccaacagcacgtcctctactccttccagtcccaccattactagtgcagcaggatatgat
ggaaagacttttgggtcacctatgattgatttgagctcacccgtgggaggtccctataat
cttccttctcttccagatattgactgctcaagtactattatgctggacaatattgtgagg
aaagatactagtacagatcatggccagccaagaccaccctcaaacagaaccgtccagtca
ccgaattcatcagtgccatctccaggccttacaggacctgttactatgacaagtgtacac
ccaccaatacgttcacctagtgcctccagcgttgggagccgaggaagctctggctcttcc
agcaaaccagcaggagctgattctacacacaaagtcccagtggtcatgttggagccaatc
cgaataaaacaagaaaacagtggaccacctgaaaattatgattttcctgttgttatagtg
aaacaagaatcagatgaagaatctagggctcaaaataccaactatccaagaagcatactc
acctccctgctcttaaatagtagtcagagctctgcatctgaagagtctgtgttaagatca
gatgcccctgacagcacaggagatcaacctggacttaaccaggaaaattcctcaaatgga
aagtctgagtggctagatgcctcacagaagtcaccccttcacgttggagagacaaggaaa
gaggatgaccccaatgaggactggtgtgcagtttgtcagaatggaggggaactcctatgc
tgtgagaaatgtcccaaagtattccatctctcttgtcatgtgcccacattggcaaatttt
ccaagtggagagtggatttgcactttctgccgagacttatctaaaccagaggttgaatat
gattgtgatgctcccattcacaactcagaaaaaaagaaaactgaaggccttatcaaacta
acaccaatagataaaaggaagtgtgaacgcctacttttatttctttattgccatgaaatg
agcctggcttttcaagacccagttcctctaactgtgccagattattacaaaataattaaa
aatccaatggacttgtcaaccatcaagaaaagactacaagaagattattccatgtataca
aagcctgaagattttgtagctgattttagattgatctttcaaaactgtgctgaattcaat
gagcctgattcagaagtagccaatgctggtataaaacttgaaagctattttgaagaactt
ctgaagaacctttatccagaaaaacggtttcctaaagtagaattcaggaatgaatcagaa
gataataaatttagtgatgactcagatgatgactttgtacagccccggaagaaacgcctc
aaaagcatagaggaacgccagttgcttaaataa
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