Phocoena phocoena (harbor porpoise): 136128021
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Entry
136128021 CDS
T11058
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136128021 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
136128021 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Swi3
Motif
Other DBs
NCBI-GeneID:
136128021
NCBI-ProteinID:
XP_065739728
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All DBs
Position
9:35640680..35780883
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AA seq
1005 aa
AA seq
DB search
MAARPSRAAGPGGSQRSRVKPPPGRGLKELLPPLAAAQAVFAAATAVAMLRETSLSIWGW
GSLGIVLSLITFGPFVIFYLAFYILCFVGGGFVVTLLFGKTNSEKDLEQCEHSFLPPTST
GIPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLE
IRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKITEKDDQVKGTAED
LVDTFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVRE
ILARGILLPLINQLSDPDYINQYIIWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAE
ELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTV
PLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLSSRQKDGRHQTN
QTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYEL
MLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSN
VSSDDSVQLHAYISDTGVCNDHGKTYALYAITVHRRSLNSEEMWKTYRRYSDFHDFHMRI
TEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHYVYDF
LENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSFAEGMTKMSDNMGKMSERL
GQDIRQSFFKVPPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLMDEVFDLKERNQW
LRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDAFWPNGILAETVP
CRDKAIRMRTRVAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFL
EGFLESLFPQYKFRELFNRLHSRSKQMQKYKQKLHTTQAPSLQKR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtccgtcgagagctgccgggccggggggaagccagcgaagccgagtaaag
ccgccgcccgggagaggactgaaggagctgttgccgccgttggcggcggctcaggcagtt
ttcgctgctgctacggctgttgccatgctcagagagaccagtctgtccatatggggatgg
ggaagccttggcattgtcctttctctaataacgtttggaccctttgtaatattttatttg
gcattttatatcctctgctttgtgggtgggggttttgtggttactctcctctttggaaaa
acaaactcagagaaggacctagagcagtgtgaacactcatttcttcctccaacatcaact
gggattcctaagtgcttagaagaaatgaaacgggaagccaggactataaagatcgataga
agattgacaggtgccaatataattgatgaacctctccagcaagttatccaattttccttg
agggattatgtccagtattggtattatacactaagtgatgatgaatcttttcttcttgaa
attaggcagactcttcagaatgcactcattcagtttgctactaggtcaaaagaaatagac
tggcaaccttattttactacacgcattgtagatgattttggcacacacctacgagtattc
agaaaggctcaacagaagataacagagaaagatgatcaagtaaaaggtacagcagaagat
cttgtagataccttctttgaagttgaagttgaaatggagaaggacgtttgccgtgaccta
gtgtgcacatctcccaaagatgaagaaggattcctaagggatttgtgtgaggtcttatta
tatttattgctacctcctggagatttccagaacaagatcatgcgatactttgtcagggaa
atccttgcacgaggaattcttcttccattaataaatcaactcagtgatcctgattatatt
aatcaatatatcatatggatgatccgtgattctaactgcaactatgaggcctttatgaac
attattaaattgagtgacaatattggagagctagaagcagtccgagataaagcagcagaa
gaattacaatatcttcgatctctagatacagctggtgatgatatcaacaccatcaaaaat
caaataaatagcttattatttgtaaagaaagtatgtgactcaagaatacaacggttgcag
tcaggcaaggaaataaatactgtgaaactggcagcaaactttgggaaactttgcacagtc
cccctggacagcattcttgtagacaatgttgcactacaattttttatggattacatgcag
caaactggaggtcaggcacatctcttcttttggatgacagtggaaggataccgggttaca
gcccaacaacagctagaagttttatcaagtcgtcagaaagatggaagacatcaaaccaac
caaaccaaaggtcttttaagagcagctgctgttggaatttatgaacagtatttatcagaa
aaggcatctccaagagttactgttgatgattatttggtagcaaaattagcagatactttg
aatcatgaagatccaacacctgaaatctttgatgacattcaaaggaaggtatatgaattg
atgctacgagatgaaagattttatccttccttcaggcagaatgcactttatgtgcgcatg
ttagctgagctggatatgttaaaagatcctagtttcagaggatcagatgatggtgatgga
gaatcttttaatgggtctcctacaggaagcataaatttgtctttagatgacctttcaaat
gtatcttctgatgactcagtacaacttcatgcttacatttcagacactggcgtttgtaat
gatcatggcaagacatacgcattatatgccatcactgtacaccggcgcagtctaaacagt
gaggagatgtggaaaacctaccgtcgttatagtgacttccacgacttccacatgaggatc
accgaacagtttgaaaatctgtcaagcatattaaagcttcccggtaaaaagacttttaat
aatatggatagagattttttagaaaagagaaaaaaggatctaaatgcatatttgcagtta
ctgttaactcctgaaatgatgaaagcatccccggctttggctcactatgtgtatgatttc
cttgagaacaaagcctacagtaaagggaaaggggattttgctcgtaagatggacactttt
gtaaatccgcttcgaaattctatgaggaatgtttcaaatgcagttaaatcccttcctgat
agcttcgcagagggaatgactaaaatgtcagacaacatgggcaaaatgtcagagagatta
ggtcaagacataaggcaatcatttttcaaggttcctcctttaattccaaagactgattca
gatcctgaacattgtcgagtttcagctcaacttgatgatactgtggatgacaatattcca
cttagggtaatgctgcttctcatggatgaagtattcgacttaaaagagagaaatcagtgg
ttgcgaaggaatatcaaaaacctacttcaacagcttattagagccacatatggtgatact
attaatagaaaaatagttgaccatgttgactggatgacctcacctgagcaagtagccgac
ttagtgaaacgtttcagagatgccttttggccaaatggcattttagcagagactgttcca
tgcagagataaagctattcgaatgagaacaagagttgcaggaaaaactaaattactttca
attatgccagatgaactgaagcacattattggggctgagacaacacggaaaggtattctt
cgtgtatttgaaatgtttcagcacaaccagttaaataggaggatggtttatgtctttttg
gaaggctttttggaaagcttatttccacagtataaattccgtgaacttttcaacagactg
cattcacggtcaaagcagatgcagaaatataaacagaaacttcatactactcaagcgcct
tctttacagaaaaggtga
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