Phocoena phocoena (harbor porpoise): 136128037
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Entry
136128037 CDS
T11058
Symbol
PEX1
Name
(RefSeq) peroxisomal ATPase PEX1 isoform X1
KO
K13338
peroxin-1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136128037 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136128037 (PEX1)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
136128037 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_5
AAA_22
TIP49
AAA_33
ABC_tran
AAA_18
AAA_29
AAA_28
DUF815
AAA_7
Sigma54_activ_2
NPHP3_N
RNA_helicase
AAA_19
Mg_chelatase
IstB_IS21
AAA_2
Parvo_NS1
CoaE
APS_kinase
AAA_10
Vps4_C
Motif
Other DBs
NCBI-GeneID:
136128037
NCBI-ProteinID:
XP_065739754
LinkDB
All DBs
Position
9:50070492..50143830
Genome browser
AA seq
1282 aa
AA seq
DB search
MWGGGRLAGAGGDGAVVTVAFTNARDCFLHLSRRLVAQLHLLQNQAIEVSWGHEPAFLSW
VEGRHFSDQGENVAEISRQFGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPLSADDWEILE
LHAASLEQNLLDQIRIVFPNAIFSVWVDQQAYIFIRIVALIPAAPYGRLETDSKLLIQPK
THEAKENTFSKADNARGKFHNFGEDQKGLTRELQTKQLQSNTVGVTGSKETDSEDTIDSS
LIPSLWTVIGSIFSFGSEKKQDTSWGLTEINAFKNMQSKVVPLDNIFRVCKSQPPSICNA
SATSLFHKHYTIHVFPWDQEYFDVEPSFTVTYGKLVKLLSPKQQQSKMKQNVLSPEKEKQ
MSEPLDQKQSSPDHSQEGGNACVLKVVWNGLEELENAIKYTKNLEALHLGKVWIPDDLRK
RLNIEMHAVVRITPVEITPKIPRFLKLQPRENLLKDISEEDIKTVFYSWLQQSTTTTLPL
IVSEEEYIKLEMKDGLKEFSLNIVHSWEKEKEETLFLLSTNLLQKMTIQVLLDPMVKEEN
SEEIDFILPFLKLNCLGGVNSLGVSSVEHITHSLLGRPLSRQLMALVAGLRNGALLLTGG
KGSGKSTLAKAVCKEAFNLLDAHVEIVDCKALRGKRLENIQKALEAAFSEAVWRQPSVVL
LDDLDLVAGLPALPEHEHSPEAVQSRRLAHALNDVVKEFISMGSLVALIATSQSQHSLHP
LLVSAQGVHIFQCVQHIQPPDQDQRCEILYNVIKNKLDCDMNKFTDLDLQCIAKETEGFV
ARDFTVLMDRAIHSCLSHQSISTREELVLTTLDLRKALRGFIPVSLRNVDLHNPRDLGWD
KIGGLHEVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGM
NFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV
VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVL
SDSLPLADDVDLQNVASVTNSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSSSDSDLS
LSSMVFLNHSSGSDDSAGDGECGLEQSLVSLEMSEVLPDESKFNMYRLYFGSSYESELGN
GTSSDLSSQCLSAPSSMTRDFPGVPGKDQSSRPPVFRTASQEGYQELTQEQRDQLRADIS
IIKGRYQSQIGEDDALNQPGPIRTSLAISQSHLMTALSHTRPSISEDDWKNFAELYESFQ
NPKKRKNQSGTVFRPGQKVTLA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcggcggtcgcctggcaggtgcggggggtgacggggcggtcgtgaccgtggcc
ttcaccaacgctcgcgactgcttcctccatttgtcgcggcgcctcgtggcccagctgcat
ctgctgcagaatcaagctatagaagtatcctggggtcacgagcctgcattcttgagctgg
gtggaaggcagacattttagtgatcaaggtgaaaatgtggctgaaattagcagacaattt
ggtcagaaacttggactttcaaatggggaacaggtgtttctcaagccttgttcccatgtg
gtgtcttgtcaacaagttgaggtggaacccctctcagcagatgattgggagatactggag
ctgcatgctgcttcccttgaacagaatcttctagatcaaattcgaatagtttttccaaac
gccattttttctgtttgggttgatcagcaagcttacatatttatccggattgttgcacta
ataccagctgctccttatggaaggctggaaactgatagcaaactccttattcagccaaag
acccatgaagccaaagagaatacattttcaaaagcagataatgcacgtggaaaatttcat
aattttggagaagaccaaaaaggattgacaagagaacttcaaaccaagcaacttcaatca
aatactgtaggagtcactgggtcaaaagaaacagattcagaggatacaattgactcatca
ttaataccaagcttatggactgtgataggaagcattttttcttttgggtctgagaagaaa
caagacacatcctgggggttaactgaaatcaatgcattcaaaaatatgcagtcaaaagtt
gttcctctggataatattttcagagtatgtaaatctcagcctcccagcatatgtaatgca
tcagcaacttctctgtttcacaaacattataccattcatgtatttccatgggaccaggaa
tattttgatgtggagcccagctttactgtgacctatggaaagctagttaaactactttct
ccaaagcaacagcaaagtaaaatgaagcaaaatgtcctgtcacctgaaaaagagaagcag
atgtcagaaccactagatcaaaaacagagtagcccagaccatagtcaagaaggtggcaat
gcctgtgtgctaaaggtagtctggaatggacttgaggaattggagaatgccattaaatac
accaaaaacttagaagctcttcatcttgggaaagtttggatcccagatgacctgagaaag
aggctaaatatagaaatgcatgcagtagtcagaataactccagtggaaattacccctaaa
attccaagatttctaaaattacaacctagagaaaacttacttaaagacataagtgaagaa
gacataaaaactgtgttctattcatggctacagcagtctactactaccacacttcctctg
atagtatcagaggaagaatatattaagttggaaatgaaagatgggttgaaggagttttct
ctgaatatagttcattcttgggaaaaggaaaaagaagaaactctttttctgttgagtacc
aatctgctacagaagatgacaatacaagtccttctggatcctatggtaaaagaagaaaac
agtgaggagattgactttattcttccttttttaaagctgaactgcttgggaggagtgaac
tccttaggcgtctcctccgtggagcacatcactcatagcctcctaggacgccctttgtct
cggcagctgatggcccttgtggcaggacttagaaacggagcccttttactcacgggagga
aaggggagtggaaaatcaactttagcgaaggcagtctgtaaagaagcatttaacttattg
gatgcccatgtggaaatagttgactgtaaagctttacgaggaaaaaggcttgaaaacata
cagaaagccctagaggcagctttctcagaggcggtgtggcggcagccttctgttgtcctg
ttggatgacctggatctcgttgctggcctgcctgctcttccagaacacgagcacagtcct
gaggctgtgcagagccggaggctcgcacatgctttgaacgatgtggtgaaagagtttatt
tccatgggaagtttggtggcactgattgctacaagccagtctcaacattctctacatcct
ttacttgtttctgctcaaggagttcacatatttcagtgtgtccagcatattcaacctcct
gaccaggatcaaagatgtgaaattctgtataatgtaataaaaaataaactagactgtgat
atgaacaagttcactgatcttgatctgcagtgtatagcaaaagaaactgaagggtttgtg
gctagagattttacagtgcttatggatcgagcgatacattcttgtctctctcatcagagt
atatccaccagggaagaattagttttaacaacattggacttgcgaaaggctctccgagga
tttattcctgtgtctctgcgaaatgtcgacctgcataaccctagggacctgggctgggat
aagattggaggattacatgaagttcgacagatacttgtggacactatccagttaccagcc
aagtacccagaattatttgcaaacttgcccatacgacaaaggacaggagtgctgttgtat
ggtcctcctggaacaggaaaaaccttactagctggagtaattgcacgagagagtggaatg
aattttattagtgtcaagggaccagagttactcagcaaatatattggagcaagtgaacaa
gctgtacgggatatttttattagagcacaggctgcaaagccctgcatccttttctttgat
gaatttgaatctattgcacctcgacgaggccacgataatacaggagttacagatcgtgta
gttaaccagttgctgactcagttggatggagtagaaggcttacagggtgtttatgtattg
gctgccactagtcgccctgacttgattgacccagccctgctcaggcctggccgactagat
aaatgtgtatactgtcctcctcctgatcaggtgtcacgtcttgaaattttaaacgttctc
agtgactctctacctctggcagatgatgtggaccttcagaacgtggcatcagtaaccaac
tcctttacgggagctgatctgaaagctttactttacaatgcccagttagaggccttacat
ggaaggctgctgtcttgtgggctgcaggatggaggttccagctctgatagtgacctgagt
ctgtcttcaatggtttttcttaaccacagcagtggctctgatgattcagctggagatgga
gaatgtggcttagagcagtcccttgtttctctagagatgtctgaggtgcttccagatgaa
tcaaaattcaatatgtaccggctctactttggaagctcttatgaatcagaacttggaaac
ggaacctcttctgatttgagctcacaatgcctgtcagcaccaagctccatgactcgggat
tttcctggagttcctgggaaagatcagtcctcacgacccccagtcttcagaacagcctca
caagagggttatcaagagctcacacaggaacaaagagatcaactgcgggcagatatcagt
attatcaaaggcagataccaaagccaaattggagaggatgatgcccttaaccaaccaggc
cccatcagaaccagtctggctattagtcagtcacatttaatgactgcgctcagtcacaca
aggccatccatcagtgaagatgactggaagaactttgctgagctgtatgaaagctttcaa
aatccaaagaagagaaaaaatcaaagtggaacagtgtttcgacctggacagaaagtaact
ctggcataa
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