Phocoena phocoena (harbor porpoise): 136128101
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Entry
136128101 CDS
T11058
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136128101 (MKRN1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136128101 (MKRN1)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136128101 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_UBOX
zf-CCCH_3
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_PARP12
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
136128101
NCBI-ProteinID:
XP_065739872
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All DBs
Position
9:complement(92619640..92647408)
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AA seq
482 aa
AA seq
DB search
MAEAAAPGTTATTSGARAAAAAVAAASPTPTPTVTSPSLGAGGGGGGSDGSSGGWTKQVT
CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKPLKQEEATAT
DLTAKSALAASSSLSSVVGPIVEVNMGEAEARNSNFSTVGAGSEDWVNAIEFVPGQPYCG
RTAPSSTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCG
LQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFG
ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQK
YKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRCRAQRRNHFW
ELIEEREHGNPFDNDDEEVVTFELGEMLLMLLAAGGDDDLTDSEDEWDLFHDELEDFYDL
DL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcagctcccggaacaacagccacaacatcaggagcacgagcggcagcg
gcggcggtggcagcggcctcccccacccctacccccacagtcacctccccgtccctgggg
gcggggggcgggggaggcggcagcgacggcagcagcggcggctggactaaacaggtcacc
tgcaggtatttcatgcatggggtttgtaaggaaggagataactgtcgatactcacatgac
ctctctgacagtccatatggtgtagtgtgcaagtattttcagcgagggtactgtatttac
ggagaccgctgcagatatgaacacagcaagccattgaaacaggaagaagcaactgctaca
gatctaactgcaaagtcagcccttgctgcttcctcaagtctctcatcagtagttggaccg
attgttgaagtgaatatgggcgaagctgaggcaagaaattcaaacttttcaactgtagga
gcgggttcagaagactgggtgaacgccattgagtttgttcctgggcaaccctactgtggc
cgtactgccccttcctccactgaagcacccctgcagggctcagtgaccaaggaagaatca
gagaaggagcaaactgcagtggaaacaaagaagcagctctgcccctatgctgcggtggga
gagtgccgatatggggagaactgtgtgtatctccacggagactcgtgtgatatgtgtggg
ctgcaggtcctccatccaatggatgctgcccaaagatcacaacatataaaatcttgcatc
gaggcccacgagaaggacatggagctctcgtttgctgtacagcgcagcaaggacatggtg
tgtgggatctgcatggaggtggtctatgaaaaagccaaccccagcgagcgccgcttcggg
atcctctccaactgtaaccacacctactgtctcaagtgtattcgcaagtggcggagtgct
aagcagtttgagagcaagatcataaagtcctgcccagaatgccgcatcacatctaacttt
gtcattccaagtgagtactgggtggaggagaaagaagagaagcagaaactcattcagaaa
tacaaggaggcaatgagcaacaaggcgtgcaggtattttgatgaaggacgcgggagctgt
ccatttggagggaactgtttttacaagcatgcgtaccctgatggccgtagagaggagcca
cagagacagaaagtgggaacatcaagcagatgccgggcccaacgaaggaaccacttctgg
gagctcattgaggaaagagagcacggcaaccccttcgacaacgacgacgaagaggttgtc
accttcgagctgggcgagatgttgcttatgcttttggctgcaggtggggacgacgacctg
acggactctgaagacgagtgggacttgtttcacgatgagctggaagatttttatgacttg
gatctatag
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