Phocoena phocoena (harbor porpoise): 136128271
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Entry
136128271 CDS
T11058
Symbol
DYNC1I1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04145
Phagosome
pphc04814
Motor proteins
pphc04962
Vasopressin-regulated water reabsorption
pphc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136128271 (DYNC1I1)
09142 Cell motility
04814 Motor proteins
136128271 (DYNC1I1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
136128271 (DYNC1I1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136128271 (DYNC1I1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136128271 (DYNC1I1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136128271 (DYNC1I1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
136128271 (DYNC1I1)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
136128271 (DYNC1I1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_WDR5
Dynein_IC2
Beta-prop_EML
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
CFAP43_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
136128271
NCBI-ProteinID:
XP_065740140
LinkDB
All DBs
Position
9:complement(46836356..47174597)
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRRETE
ALLQSIGISPEPPLVQSLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSEAGSQDSGDLGPL
TRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSE
EDEDDEEMVEPKVGQDSELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRV
IERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYP
ELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGT
YSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSL
DMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVF
EGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMW
SPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEG
RIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGTVELSA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgacttaaaagctgagctagagcgcaaaaaacagcgcttagcacag
ataagagaagagaagaaacggaaggaagaggagaggaaaaagaaagaggctgatatgcag
cagaagaaagaaccagttcaggatgactctgacctggatcgcaaacgccgagagacagag
gctttgctgcaaagcattgggatatcgccggagccccctctagtgcagtcgctgcatttt
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcctcg
aaatcagtgagcactcccagtgaagctggaagccaagactcaggcgacctgggaccattg
acaaggaccctgcagtgggacacagacccctcagtgctccagctgcagtcagactcagaa
cttggacgaagactgcataagctgggtgtgtcgaaggttacccaagtggatttcctgccc
agggaggtagtgtcctactccaaggagacccagactcctctggctacacatcagtccgaa
gaggatgaggatgatgaggaaatggtagaacctaaagttggccaggattcagaactggaa
aatcaagacaaaaaacaggaggtgaaggaagctcctccaagggagctgacagaggaagaa
aaacagcagatccttcactcagaggaatttctcatcttttttgatcggacaatacgggta
attgaaagagcgctggcagaagactccgatatcttctttgactatagtggtcgagagtta
gaggaaaaagatggggatgtccaggctggagccaacctttctttcaatcgtcagttctac
gatgagcattggtccaagcaccgagtagtcacttgtatggactggtctctccagtacccc
gagctgatggtcgcttcctacaacaacaacgaagatgctccccatgaaccagatggagtg
gccttggtttggaacatgaagtttaagaaaaccacaccagaatacgtcttccactgtcag
tcctctgtgatgtcagtctgctttgctcgtttccatcccaatttggtagttggtgggact
tactcgggccagattgtcctgtgggataatcgcagtcatcggaggacgccagtccagcgg
acacccttgtcggctgctgcacacacacatcccgtgtactgtgtaaatgttgttgggacc
cagaatgctcataacctcatcactgtctctaccgatggtaaaatgtgttcctggagcctg
gacatgctctccactccacaggagagcatggagctggtgtacaataagtccaagcctgtg
gctgttaccggaatggctttcccaacgggagacgtcaataacttcgtggttggcagcgag
gagggtacagtctacacggcctgtcgtcatggaagcaaagcaggtattggggaagtcttc
gaaggccaccaagggccagtgacaggaattaactgccacatggcagtgggcccaatcgac
ttttcacacctgtttgtcacgtcgtcgttcgactggaccgtcaaactgtggaccacaaag
cacaacaagccgctctactcctttgaagacaatgcagactatgtgtacgatgtcatgtgg
tcccccgtgcatcccgcgctctttgcctgcgtggacgggatggggcgcttggacctctgg
aacctcaacaatgacaccgaggttccaacagcaagtgtggccattgagggggcatccgcc
ctaaaccgtgttcgttgggctcaaggtggcaaagaagttgccgttggggactcagaaggc
cgtatttggatctatgacgtcggagagcttgcagttccccacaacgatgagtggacccga
tttgccaggaccctcgtggagattcgtgcgaacagagctgacagcgaggaggagggcacc
gttgagttatctgcctag
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integrated database retrieval system
