Phocoena phocoena (harbor porpoise): 136128319
Help
Entry
136128319 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03060
Protein export
pphc04141
Protein processing in endoplasmic reticulum
pphc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
136128319
04141 Protein processing in endoplasmic reticulum
136128319
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136128319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136128319
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pphc02044
]
136128319
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
136128319
Secretion system [BR:
pphc02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
136128319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF2975
Motif
Other DBs
NCBI-GeneID:
136128319
NCBI-ProteinID:
XP_065740203
LinkDB
All DBs
Position
9:complement(44770982..44772400)
Genome browser
AA seq
450 aa
AA seq
DB search
MGITFLDVIKPFCAVLPEIQKPERKIPLFGIMSSDSADPFYWMRVIFAFNRGTLMELGIS
PVVTSGLIMQSSAEAKIIEVGDIPKDRALFSGAPKLSGMIITIGQAIVYVMTDLYGDPAE
MGAGICLLVIIQLFVAGLIVLLLDELLQKGYDLGSGISLFIATNMCETIVWKAFSPTTIN
SGRGTEFEGAVIAVFHLLATRTDTGQALREAFNHQNLPNLMNLIATVFVFAVIYFQGFHV
DLPIKSAQYXGQYSSYPKLFYTSNIPIXSNLYVISQMLSVRFLVNLPGNFLVNLPGPWAD
VSWGGPAYSYPVGGLCYYLSPPESMGTIFEDPVHVVVYSIFLLGSCAFLSKMWIVVSCSS
AKDVAEQLKEQQIIMRGHRDTSVVHELNRCIPIAAVFGNLCIGALSVLADFLGAIGSDTG
ILLAVTIIYQYFEVFVKEQAEVGGMGALFF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcacatttttagacgttatcaaacctttctgtgcagttctaccagaaattcag
aaacctgaaaggaagataccactatttggaatcatgtcatcagattctgcagatcctttc
tactggatgagagttatttttgctttcaacagaggaactttaatggaattgggtatctcc
ccagttgtaacatctggtttgattatgcagtcgtcagctgaagccaaaatcattgaagtt
ggagatatacccaaagacagagccctattcagtggagccccaaaactatctggtatgatc
attacgattgggcaagccattgtgtatgtcatgacggacctgtatggggatcccgctgaa
atgggtgctggaatctgtctccttgtcatcattcagttgtttgttgctggtttgattgtg
ctgctgttagatgagctgctacagaagggttacgacctggggtctggaatttcactcttt
attgccaccaacatgtgtgaaaccattgtctggaaggcctttagtcccactaccattaac
agtggcagaggtactgagtttgagggtgcagtcatagctgtctttcatttactggccacc
aggacagacacaggtcaagctctaagggaggctttcaatcatcagaatttacccaatctc
atgaacctcattgctacagttttcgtgtttgctgttatatattttcagggatttcatgtg
gatctgcccattaagtcggcccagtactgagggcagtacagcagctaccccaagctcttc
tacacctccaacatccccatcnnatccaacctgtatgttatttcccagatgctgtcagtt
cgatttttagtaaatttaccaggcaactttttagtaaatttaccaggaccgtgggctgat
gtcagttggggaggacctgcttattcttacccagtggggggcctttgttactacctttct
cctcctgagtccatgggcaccatatttgaggatcctgtccatgtggttgtttatagcatc
ttcctgttgggatcatgtgcattcttgtctaagatgtggatagtggtgtcttgttcctca
gccaaagatgtagctgaacagcttaaagaacagcaaatcataatgagaggccacagggat
acatctgtggttcatgagcttaataggtgcatccccatagcagctgtgttcggcaacttg
tgcatcggcgccctgtccgtgttggctgacttcctcggggccatcggctcagacactgga
attctgcttgcagtcactattatttatcagtattttgaagtatttgttaaagaacaggct
gaagttggtgggatgggtgctttgtttttctaa
DBGET
integrated database retrieval system
