Phocoena phocoena (harbor porpoise): 136128787 Help Entry 136128787         CDS       T11058                                  Name (RefSeq) toll-like receptor 9 isoform X1   KO K10161   toll-like receptor 9 Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04142   Lysosome biogenesis pphc04620   Toll-like receptor signaling pathway pphc05132   Salmonella infection pphc05142   Chagas disease pphc05143   African trypanosomiasis pphc05144   Malaria pphc05152   Tuberculosis pphc05162   Measles pphc05168   Herpes simplex virus 1 infection pphc05235   PD-L1 expression and PD-1 checkpoint pathway in cancer Brite KEGG Orthology (KO) [BR:pphc00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     136128787  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     136128787  09160 Human Diseases   09161 Cancer: overview    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     136128787   09172 Infectious disease: viral    05162 Measles     136128787    05168 Herpes simplex virus 1 infection     136128787   09171 Infectious disease: bacterial    05132 Salmonella infection     136128787    05152 Tuberculosis     136128787   09174 Infectious disease: parasitic    05144 Malaria     136128787    05142 Chagas disease     136128787    05143 African trypanosomiasis     136128787  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:pphc04054]     136128787    04090 CD molecules [BR:pphc04090]     136128787 Pattern recognition receptors [BR:pphc04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    136128787 CD molecules [BR:pphc04090]  Proteins   136128787 SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 LRR_4 Cofilin_ADF LRR_12 LRR_14 LRR_EndoS LRR_6 TIR LRR_9 LRR_Zer-1 TIR_2 Motif Other DBs NCBI-GeneID:  136128787 NCBI-ProteinID:  XP_065740757 LinkDB All DBs Position 10:36479059..36496667 Genome browser AA seq 1323 aa AA seqDB search MAHQTGIHATEELKEFFAKARAGSVRLIKVVIEDEQLVLGASRELVGCWDQDYDGAVLPL LDAQQPCYLLYRLDTQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDE LFGTVKDDLSFAGYQKHLSSCAAPAPLTSAERELQQIRINEVKTEISVESKHQTLQGLAF PLQPQAQRALQQLRQKTVNYIQLKLDLERETIELVHTEPTDVAQLPSRVPRDAARYHFFL YKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFQLEIAKKGPCRAR HPLSLLVQAVALAAALAQGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSAVAPRANVTSL SLLSNRIHHLHDSDFAHLSSLRILNLKWNCPPAGLSPMHFPCHMTIEPNTFLAVPTLEEL HLSYNGITSVPALPRSLVSLSLSHTNILVLDPTHFAGLHALRFLYMDGNCYYKNPCHRTL EVAPGALLGLGNLTHLSLKYNNLTEVPRLLPPSLETLLLSYNHIVTLAPEDLANLTALRV LDVGGNCRRCDHARNPCMECPKHFPKLHPDTFGHLSRLEGLVLKDSSLYSLDNRWFRGLG RLQVLDLSENFLYDCITKTTAFRGLARLRSLNLSFNYHKKVSFAHLHLAPSFRGLLSLKE LDMHGIFFRSLSETTLQPLTRLPMLQILRLQMNFINQAQLSIFGAFPGLLYVDLSDNRIS GAARPAATLGEVDSGPKIWLPSRDLAPGPLDTLSLEDFMLSCKNFSFTLDLSRNNLVSIQ PEMFARLSRLQCLRLSHNSISQAVNGSQFVPLTSLRVLDLSHNKLDLYHGSSFTELPRLE ALDLSYNSQPFSMQGVGHNLSFVAQLRSLRYLSLAHNDIRSRVSQQLCSASLQALDFSGN ALSQMWAEGDLYLRFFQGLRSLVLLDLSQNRLHTLLPCTLDNLPKSLKLLRLRDNNLGFF NWSSLALLPQLETLDLAGNQLKALSNGSLPSGTRLRKLDLSGNSIGFVTPGFFVLAKRLE ELNLSANALKTVEPSWFGSLAGTLKILDVSTNPLHCACGAAFVDFLLKVQAAVPGLPSRV KCGSPRQLQGRSIFAQDLRLCLDEALSWDCFGLSLMVVALGLAVPMLHHLCGWDLWYCFH LCLAWLPRWGQRRGADALFYDAFVVFDKAQSAVADWVYNELRVQLEERRGRRALRLCLEE RDWLPGKTLFENLWASVYSSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVI LRPEAYRSRYVRLRQRLCRQSVLLWPHQPSGQGSFWAQLGTALTRDNRHFYNRNFCRGPT TAE NT seq 3972 nt NT seq  +upstreamnt  +downstreamnt atggcgcaccagaccggcatccacgctaccgaggagctgaaggagttctttgccaaggcg cgggctggttctgtgcggctcatcaaagtcgtcattgaggacgagcagctcgtgctgggt gcctcgagggagctggtgggctgctgggaccaggactatgatggggccgtgctgccgctg ctggatgcccagcagccttgctacctgctctaccgcttggacacgcagaacgcccagggc ttcgagtggctcttcctcgcctggtcacctgataattcccctgtgcggctgaagatgctg tatgcagccacacgggccacagtgaagaaggagtttgggggcggccacatcaaggatgag ctcttcggaactgtgaaggatgacctctcctttgctgggtaccagaagcacctgtcatcc tgtgcggcacccgccccgctgacctcggccgagagagaacttcagcagatccgtattaac gaggtgaagacagagatcagtgtggagagcaaacaccagaccctgcagggcctggccttc cctctgcagcctcaggcccagcgggcacttcagcagctcagacagaagacagtcaactac atccagctgaagctggacctggagcgggagaccatcgaactggtgcacacagagccaacg gacgtggcacagctgccatcacgggtgccccgagatgccgcccgctaccacttcttcctc tacaagcacacccatgagggtgaccccctggagtctgtggtgttcatctactcgatgcct ggctacaagtgcagcatcaaggagcgcatgctctactccagctgcaagagccgcctcctc gattccgtggagcaggacttccagctggagatcgccaagaagggcccctgccgtgcccgg caccccctttctctcctggtgcaggcggtggcactggctgcagccctggcccagggcacc ctgcctgctttcctgccctgtgaactccagccccacggcctggtgaactgcaactggttg ttcctgaagtccgtgccacacttctcggctgtggcgccccgggccaatgtcaccagcctc tctttgctttccaaccgcatccaccacctgcatgactccgacttcgcccacctgtccagc ctgcggatcctcaacctcaagtggaactgcccgccggccggcctcagccccatgcacttc ccctgccacatgaccatcgagcccaacaccttcctggccgtgcccaccctcgaggagctg cacctgagctacaacggcatcacgtccgtgcccgccctgcccaggtccctcgtgtccctg tcgctgagccacactaacatcctggtgctagaccccacccacttcgccggcctacacgcc ctgcgctttctgtacatggacggcaactgctattacaagaacccctgccaccggacactg gaggtggccccgggcgccctccttggcctgggcaacctcacgcacctgtcgctcaagtac aacaacctcacggaggtgccccgcctcctgccccccagcctggagaccctgctgttgtcc tataaccacattgtcaccctggcgcccgaggacctggccaatctgaccgccctgcgcgtg ctggacgtgggtgggaactgccgccgctgtgaccatgcccgcaacccctgcatggagtgt ccgaagcacttccccaagctgcaccccgacaccttcggccacctgagccgcctcgaaggc ctggtgttgaaggacagttctctctacagcctggacaacagatggttccgtggcctgggc aggctccaagtgctagacctgagtgagaacttcctctatgactgcatcaccaagaccacg gccttccggggcctggcccggctgcgcagcctcaacctgtccttcaattaccacaagaag gtgtccttcgcccacctgcacctggcgccctccttcaggggcctgctctccctgaaggag ctggacatgcacggcatcttcttccgctcgctcagcgagaccacgcttcagccgctgaca cgcctgcccatgctacagattctgcgtctgcagatgaacttcatcaaccaggcccagctc agcatcttcggggccttcccgggcctgctctacgtggacctgtcggacaaccgcatcagt ggagctgcaaggccggcagccaccttgggggaggtggacagtgggccgaagatctggctg ccgtccagggacctcgctccaggcccactggacactctcagtttggaggacttcatgcta agctgcaagaacttcagcttcaccttggacctgtcacggaacaacctggtgtcgatccag ccagagatgtttgcccgcctctcgcgcctccagtgcctgcgcctgagccacaacagcatc tcgcaggcggtcaacggctcccagttcgtgccgctgaccagcctgcgggtgctggacctg tcccacaacaagctggacctgtaccacgggagctcgttcacggagctgccgcgactggag gcgctggacctcagctacaacagccagcctttcagcatgcagggcgtgggccacaatctc agcttcgtggcccagctgcgctccctgcgctacctcagcctggcacacaacgacatccgt agccgtgtgtcccagcagctctgcagcgcctcgctgcaggccctggatttcagtggcaat gccctgagccagatgtgggctgagggagacctctatctccgcttcttccaaggcctgaga agcctggtcctgctggacctgtcccagaaccgcctgcataccctcctgccatgtaccctg gacaacctccccaagagcctgaagctgctgcgtctccgtgacaataacctgggcttcttc aactggagcagcctggccctcctgccccagctggaaacactggacctggcgggaaaccag ctgaaggccctgagcaatggcagcctgccgtctggtacccggctccggaagttggacctc agcggcaacagcattggcttcgtgacccccggcttctttgtgctcgccaagcggctggaa gagctcaacctcagtgccaacgccctcaagacggtggagccctcctggtttggctcccta gcgggcaccctgaaaatcctagacgtgagcaccaacccgttgcactgcgcctgtggggcg gccttcgtggacttcctgctgaaggtgcaggctgccgtgcccgggctgcccagccgagtc aagtgtggcagtccgcgccagctccagggccgcagcatcttcgcacaggacctgcgcctc tgcctggacgaggccctctcctgggactgttttggcctctccctgatggtggtggccctg ggcctggctgtgcccatgctgcaccacctctgtggctgggacctctggtactgcttccac ctgtgcctggcctggctgccccggtgggggcagcggcggggcgcagatgccctgttctac gatgccttcgtggtcttcgacaaggcacagagcgcagtggccgactgggtgtacaacgag ttgcgggtgcagctggaggagcgccgtgggcgccgggcactccgcctatgcctggaggag cgtgactggctacccggcaagacgctctttgagaacctgtgggcctcggtctatagcagc cgcaagaccttgtttgtgctggcccacacggaccgggtcagcggcctcttgcgtgccagc ttcctgctggcccagcagcgcctgctggaggaccgcaaggacgtcgtggtgctggtgatc ctgcgccccgaagcctaccgctcccgctacgtgcggctgcgccagcgcctgtgccgccag agcgtcctcctttggccccaccagcccagtggccagggcagcttctgggcccagctgggc acagccctgaccagggacaaccgccatttctacaaccggaacttctgccggggccccacg acagccgaatag

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