Phocoena phocoena (harbor porpoise): 136128840
Help
Entry
136128840 CDS
T11058
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03250
Viral life cycle - HIV-1
pphc03272
Virion - Hepatitis viruses
pphc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136128840 (PDCD6IP)
03272 Virion - Hepatitis viruses
136128840 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136128840 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136128840 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphc04147
]
136128840 (PDCD6IP)
Membrane trafficking [BR:
pphc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
136128840 (PDCD6IP)
Exosome [BR:
pphc04147
]
Exosomal proteins
Proteins found in most exosomes
136128840 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
Ly49
Motif
Other DBs
NCBI-GeneID:
136128840
NCBI-ProteinID:
XP_065740869
LinkDB
All DBs
Position
10:complement(51504293..51563718)
Genome browser
AA seq
875 aa
AA seq
DB search
MATFVSVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPVLAAKHCIMQAYAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYV
NVKEFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVSVPISQKFTDLF
EKMVPVSVQQSLAACGQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDISGDTVPQ
SILTKSTSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEETTDNDLRAKFKER
WQRTPSNELYKPLRAEGSNFRTVLDKAVQADGQVKERYQAHRDTIALLCKPELELNAAIP
SANPAKTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVIN
EEAISVTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILIRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPTPAYQSSPAGGHTPMPPTPAPRTMPPTKPQPPARPPPPVLPANRTPPATAPA
PAPASTGTTAPAPSQTPGSAPPLQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPY
PPVYHQSPGQAPYPGPQQPSYPFPQPPQQPYYPQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcgtctcagtgcagctgaagaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcgccgcgccgcgctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatactatgatcagatctgttccattgaaccc
aaattcccattttctgaaaaccagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatctgtaaaattggctcttgcaagcctaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcggaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattatcagtttgctagtggtgccttt
ttgcatattaaagagacggttttatctgccttgaatagagagcctactgtggacatatct
ccagataccgttgggactctcagtcttatcatgctggcacaggcccaagaagtatttttt
ttaaaagccacaagagataaaatgaaagatgctatcatagctaaattggctaatcaggct
gcagattattttggtgatgcttttaaacagtgtcagtacaaagatactctccccaagtat
ttttatttccaggaggtgtttcctgtcttggctgcaaagcactgtatcatgcaggcctat
gctgagtaccaccagtctatcctggcaaaacagcagaagaaatttggagaagagattgca
aggttacagcatgcggcagaattgattaaaacagtggcatctcgctatgatgaatatgtc
aatgtgaaggaattttctgacaaaatcaaccgtgcccttactgcagcaaagaaggataat
gacttcatttatcatgatcgagttccagaccttaaagatctagaccctattggcaaagcc
acacttgtgaaatctacgccagtcagtgtacccatcagccagaaattcactgatctgttt
gagaagatggttcctgtgtcagtgcagcagtctttggctgcctgtggtcagaggaaagct
gatttagttaacagatcaattgctcaaatgagagaagccaccactttggcaaatggggtg
ttagcttcacttaatcttccagcagcaattgaagatatatctggagatactgtacctcag
tctatactgactaagtccacatctgtgattgaacagggaggcatccagactgttgatcag
ttgatcaaagagctacctgaacttctacaaagaaatagagaaatcctagatgagtcatta
agactgttggatgaagaagaaacaactgacaatgatttaagagcaaaattcaaggaacgc
tggcaaaggacgccatccaatgaactctataagcccttaagagcagagggaagcaacttc
agaactgttttggataaagctgtgcaagcagatggacaggtgaaagagcgttaccaggct
caccgggacaccattgcacttctgtgtaagccggagctggagctgaatgctgccatcccg
tctgctaacccagcaaagaccatgcagggcagcgaggttgtaaatgtcttaaaatcctta
ctgacaaatcttgatgaagtaaagaaggaaagagaggggctggagaatgacctgaaatca
gtaaattttgacatgacgagcaaatttttgactgctctggctcaagatggtgtgataaat
gaagaagctatttctgttactgaactggatcgaatctatgggggtcttacaactaaagtc
caagaatctctaaagaaacaagaaggacttcttaaaaatattcaggtctcacaccaggaa
ttttcaaaaatgaaacagtctaacaatgaagctaatttaagagaagaagttttgaagaat
ttagccactgcgtatgacaactttgttgaactcgtagctaatttgaaggagggcacaaag
ttttacaatgagctgactgaaatactcatcaggttccagaacaaatgcagtgatatagtg
tttgcacggaagacagagagggatgaactcttaaaggacttgcaacaaagcattgccaga
gaacctagtgctccttcaattcctacacctgcgtatcagtcctctcccgcagggggacac
acgccaatgcctccaactccagcaccgagaaccatgccgcctactaagccccagccccca
gcccggcctccacctcctgtgcttccagcaaatcgaactcctcctgctactgctccagct
ccagctccagcgagcactgggaccactgcaccagctccatcacaaactcctggttcagct
ccccctctgcaggcccagggacccccataccccacctatccagggtatcccgggtattgc
caaatgcccatgcccatgggctataatccttacgcgtacggccagtataatatgccatat
ccgccagtgtatcaccagagtcctggacaggctccgtacccaggaccccagcagccttca
taccccttccctcagcccccacagcagccttactatccacagcagtag
DBGET
integrated database retrieval system
