Phocoena phocoena (harbor porpoise): 136128871
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Entry
136128871 CDS
T11058
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136128871 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pphc03037
]
136128871 (POC1A)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
136128871 (POC1A)
Cilium and associated proteins [BR:
pphc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
136128871 (POC1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_SCAP
CFAP251_N
Beta-prop_WDR19_1st
DSE1_N
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_Vps41
ASA1
eIF2A
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
PAC11
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_IP5PC_F
TRM82_WD
Tricorn_2nd
BCAS3_WD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_VPS8
Beta-prop_IFT122_2nd
Beta-prop_ACSF4
PROPPIN
Motif
Other DBs
NCBI-GeneID:
136128871
NCBI-ProteinID:
XP_065740942
LinkDB
All DBs
Position
10:36534937..36610901
Genome browser
AA seq
475 aa
AA seq
DB search
MEPAIQLSFQSGGKKPRRRVSFNRGGRGGAKRPALLLAAVGGAETERDATAAAASSGSSG
ALDAPGPAMAAPCLEDPSLERHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQS
RAYRFAGHKDTVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSIHFC
SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKVW
DKTSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV
NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD
EQVMVWKSNFDVVNYGEVLRVQRPPAMLASSSRTLPEVDSPVPPGRGRSQESMQSQPQEP
VSIPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTPP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagccggccatacagctctccttccagtcggggggcaaaaagccgaggcgccgcgtc
tcctttaaccgcggtgggcggggcggggcgaagcgacccgcgttgctattggcggcggtt
gggggcgcggaaactgaacgggacgcaactgcagccgctgcttcttcgggctcctctggc
gccttggacgcccctggccccgccatggccgcaccctgcctggaggacccctcgctggag
aggcattttaagggccaccgggatgcagttacctgtgtggacttcagtctcaacacgaag
cagctggccagtggctccatggactcatgcctcatggtgtggcacatgaaaccccagtca
cgtgcctaccgcttcgccggccacaaggacaccgtcacctgtgtgaacttctccccttcg
ggacacctgcttgcctcaggctcccgtgacaagactgtccgcatctgggtacccaacgtc
aaaggcgagtcaaccgtgtttcgtgcacacacggccacagtgaggagcatccatttctgc
agcgatggccagtccttcgtgacagcctccgacgacaagacagtcaaggtgtggtcaact
catcgccagaaattcctgttctccctgagccagcacatcaactgggtccgctgtgccaag
ttctccccggatgggcggctcatcgtgtctgccagtgacgacaagactgtcaaggtgtgg
gacaagaccagccgggagtgtgtccactcgtactgtgagcacggcagctttgtcacctac
gtggacttccaccccagtggcacgtgcatcgccgccgccggcatggacaacacggtgaag
gtgtgggacgtgcggactcaccggctcttgcagcactatcagttgcacagtgcggcggtg
aacgccctctccttccacccgtcgggaaactacttggtcacggcctccagtgactcaacc
ctgaagatcctggacctcatggagggccggctgctctacacgctccatggacatcagggt
ccagccaccactgttgccttttcaagaacgggggagtattttgcttctggaggttctgat
gaacaagtaatggtttggaagagtaactttgatgttgtcaattacggagaagtcctaaga
gtgcagaggcccccggccatgctggccagctcctccaggactctgccagaagtggattcc
cctgtcccgccaggcaggggcaggagtcaggagtcgatgcagagccagccccaagagccc
gtcagcattccccagacactgaccagcacgctggagcacattgtaggccagctggacgtc
ctcacccagacagtctccatcctggagcagcggttgacactgacagaagacaagctgaag
cagtgtctggagaaccagcagctaatcatgcagagaacaccaccatga
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