KEGG   Phocoena phocoena (harbor porpoise): 136128871
Entry
136128871         CDS       T11058                                 
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
  KO
K16482  centriolar protein POC1
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pphc03036]
    136128871 (POC1A)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pphc03037]
    136128871 (POC1A)
Chromosome and associated proteins [BR:pphc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    136128871 (POC1A)
Cilium and associated proteins [BR:pphc03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   136128871 (POC1A)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 eIF2A Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_IFT122_2nd PROPPIN
Other DBs
NCBI-GeneID: 136128871
NCBI-ProteinID: XP_065740942
LinkDB
Position
10:36534937..36610901
AA seq 475 aa
MEPAIQLSFQSGGKKPRRRVSFNRGGRGGAKRPALLLAAVGGAETERDATAAAASSGSSG
ALDAPGPAMAAPCLEDPSLERHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQS
RAYRFAGHKDTVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSIHFC
SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKVW
DKTSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV
NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD
EQVMVWKSNFDVVNYGEVLRVQRPPAMLASSSRTLPEVDSPVPPGRGRSQESMQSQPQEP
VSIPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTPP
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggagccggccatacagctctccttccagtcggggggcaaaaagccgaggcgccgcgtc
tcctttaaccgcggtgggcggggcggggcgaagcgacccgcgttgctattggcggcggtt
gggggcgcggaaactgaacgggacgcaactgcagccgctgcttcttcgggctcctctggc
gccttggacgcccctggccccgccatggccgcaccctgcctggaggacccctcgctggag
aggcattttaagggccaccgggatgcagttacctgtgtggacttcagtctcaacacgaag
cagctggccagtggctccatggactcatgcctcatggtgtggcacatgaaaccccagtca
cgtgcctaccgcttcgccggccacaaggacaccgtcacctgtgtgaacttctccccttcg
ggacacctgcttgcctcaggctcccgtgacaagactgtccgcatctgggtacccaacgtc
aaaggcgagtcaaccgtgtttcgtgcacacacggccacagtgaggagcatccatttctgc
agcgatggccagtccttcgtgacagcctccgacgacaagacagtcaaggtgtggtcaact
catcgccagaaattcctgttctccctgagccagcacatcaactgggtccgctgtgccaag
ttctccccggatgggcggctcatcgtgtctgccagtgacgacaagactgtcaaggtgtgg
gacaagaccagccgggagtgtgtccactcgtactgtgagcacggcagctttgtcacctac
gtggacttccaccccagtggcacgtgcatcgccgccgccggcatggacaacacggtgaag
gtgtgggacgtgcggactcaccggctcttgcagcactatcagttgcacagtgcggcggtg
aacgccctctccttccacccgtcgggaaactacttggtcacggcctccagtgactcaacc
ctgaagatcctggacctcatggagggccggctgctctacacgctccatggacatcagggt
ccagccaccactgttgccttttcaagaacgggggagtattttgcttctggaggttctgat
gaacaagtaatggtttggaagagtaactttgatgttgtcaattacggagaagtcctaaga
gtgcagaggcccccggccatgctggccagctcctccaggactctgccagaagtggattcc
cctgtcccgccaggcaggggcaggagtcaggagtcgatgcagagccagccccaagagccc
gtcagcattccccagacactgaccagcacgctggagcacattgtaggccagctggacgtc
ctcacccagacagtctccatcctggagcagcggttgacactgacagaagacaagctgaag
cagtgtctggagaaccagcagctaatcatgcagagaacaccaccatga

DBGET integrated database retrieval system