Phocoena phocoena (harbor porpoise): 136128900
Help
Entry
136128900 CDS
T11058
Symbol
NISCH
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136128900 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
136128900 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
LRR_14
Motif
Other DBs
NCBI-GeneID:
136128900
NCBI-ProteinID:
XP_065740993
LinkDB
All DBs
Position
10:complement(36215452..36258763)
Genome browser
AA seq
1518 aa
AA seq
DB search
MAAVARSFGPEREAEPAKEARVVGSELVDTYTVYIIQVTDGGHEWTVKHRYSDFHDLHEK
LVAERKIDKSLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLATFPDVAPRVLAHFLHFHF
YEINGITAALAEELFEKGEQLLGAGEVFAIRPLQLYAVTEQLQQGKPTCASGDAKTDLGH
ILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKSLHQVEISHCDAKRIRGLVASK
PTLATMSVRFSATSMKEVLVPEASEFDEWEPAGAALEGTVTAIIPMWQALTALDLSHNSI
SEIDESVKLIPKIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSFLEGVHTKLGNIKT
LNLAGNLLGSLSGLHKLYSLVNLDLSDNRIEQMEEVRSIGSLPCLEHVALLNNPLSIIPD
YRTKVLAQFGERASEVCLDNTVTTEKELDTVEVLKAIQKAKEVKSKLSNPEKKVSEDSRL
SAAPCVRPSSSPPSVAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLTPEDRPIARG
CSDSLESIPAGQAPSDDLRDVPGAVGGASPEHAEPEVQVVPGSGQIIFLPFTCIGYTATN
QDFIQRLSTLIRQAIERQLPAWIEAANQREEGQGEQGEDDDEEEEDVTENRYFEMGPPDV
EEEEEGGPGEEEEEEEEEEEEEEGEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQ
GSIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELC
LVLKVRHSENTLFIISDAANLHEFHADLRSCFAPQHMAMLCSPVLYGSHTSLQEFLRQLL
TFYKVVGGCQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSE
AVKSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSC
TQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAKTPAT
GGRPQSPPVDGQAAEDGARCSNEQHLQEVPAEAPAPAPAPAPAEIPALTPAKTPAPAEPS
VPALVPAEAPASAETPLEASVGASAPAAEAPAQVEAPAQYPSEHLIRSTSEENQIPSHLP
ACPSLRHIASLQGSAIVEFFHSSVAEVENEELRHLLWSSVVFYQTPGLEVTACVLLSTKA
VYFVLHDGLRRYFSEPLQDFWHQKNADYNNSPFHISQCFVLKLSDLHVVNVGLFDQYFRL
TGSSPAQVVTCLTRDSYLTHCFLQHLMAVLSLLERTPSPEPVDKDFYSEFGNKTTGKMEN
YELIHSSRVKFTYPSEEEVGDLTFTVAQKVADPEKAPSLSILLYVQAFQVGTPLSGRCRG
MLRPKTLLLTSAEIFLLDEDFVHYPLPEFAKEPPQRDRYRLDDGRRIRDLDRVLMGYQTY
PQALTLVFDDVQGHDLMGSVTLDHFGEVPGGPARGGQGREVQWQVFVPSAESREKLISLL
ARQWEALCGRELPVELTG
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcgcgcagctttggtcccgagcgggaggccgagccggccaaggaggcg
cgcgtcgtgggctctgagctcgtggacacgtatacggtttacatcatccaggtcactgat
ggcggccatgagtggacagtcaagcaccgctacagcgacttccatgacctacatgaaaag
ctcgtcgcagagaggaagatcgataaaagtttgcttccgcccaaaaagataattgggaaa
aactccaggagcttggtggaaaagagggagaaggatctggaggtctacctccagacactc
ctggccactttccctgacgtggcccccagagtgctggcccacttcttgcattttcacttc
tacgagattaatggcatcaccgcagcactggctgaggagctctttgaaaaaggagaacag
ctcctgggggccggcgaggtctttgccatcaggcccctgcagctgtacgcggtcaccgag
cagctgcagcagggaaagcccacgtgcgccagcggggatgccaagactgacctggggcac
atcctggacttcacctgtcgccttaagtaccttaaggtttctggcacagaaggacctttt
gggaccagcaacattcaggagcagcttctgccttttgatctgtcaatattcaagtctctt
catcaggtggagataagtcactgtgatgccaagcgcatccgggggctggtcgcgtccaag
cccaccttggccacgatgagtgtccgcttctcagcaacttccatgaaggaagtcctcgtt
cctgaagcctcagaatttgatgagtgggaaccagcaggcgcagccctggagggcactgtg
actgccatcatccccatgtggcaggcgctgaccgctctggacttgagtcacaacagcatc
tctgagatcgatgagtctgtgaaactgattccaaagattgagttcctggacctgagtcac
aatggagtgctggtcgtggacaatctgcagcacctgtacaacctcgtgcacctggacctg
tcctacaacaagctctccttcttggaaggggttcacaccaaattggggaacatcaagacc
ctgaacctggcaggcaacctcctggggagtctgagtggcctgcacaagctctactccctg
gtcaacctggatctcagcgacaacagaatcgaacagatggaggaggtcaggagcatcggc
agcctcccgtgtctggagcatgtggctctgctgaacaaccctctgagcatcatccctgac
taccggaccaaggtgctggctcagtttggagagcgggcctcggaggtctgtctggacaac
acagtgaccacagagaaggagttggacacggtggaagtgctaaaagcaattcagaaagcc
aaggaggtcaagtccaaattaagcaaccccgagaagaaggtcagtgaggattctaggctg
tctgctgccccgtgcgtcaggcccagcagttcccctccttctgtggctcccacctctgcc
tccctgccccagcccatcctctccaaccaaggaatcatgtttgtgcaagaagaggccctg
gccagcagcctgtcatccaccgacagtctgactcctgaggaccggcccattgcgcgggga
tgctctgattccttggagtccatccctgcgggacaggcaccttctgatgatttaagagac
gtgccgggagctgttggcggtgcaagcccagagcacgcggagccagaggtccaggtggtg
ccagggtccggccagatcatcttcctgcccttcacctgcattggctacaccgccaccaac
caggacttcatccagcgcctgagcacgctcatccggcaggccatcgagcggcagctacct
gcttggattgaggctgccaaccagcgagaggagggccagggcgagcagggcgaggatgat
gatgaggaggaggaggatgttactgagaaccgctactttgaaatggggcctccggatgtg
gaggaagaggaagagggtgggccaggagaggaagaggaagaagaggaagaagaagaggag
gaggaggagggcgaggaggagcgcctggctctggagtgggccctgggcgcagatgaggac
ttcctgctggagcacatccgcatcctcaaggtgctctggtgcttcttgatccacgtgcag
ggcagcatccgccagtttgctgcctgcctcgtgctcacggacttcggcatcgccgtcttt
gagatcccgcaccaggagtcgcggggcagcagccagcacatcctctcctccctgcgcttt
gtgttctgcttcccgcacggcgacctcaccgagttcggcttcctcatgccggagctgtgc
ctggtgctcaaggtgcgtcacagcgagaacacgctcttcatcatctcagacgccgccaac
ctgcacgagttccacgctgacctgcgctcttgcttcgccccgcagcacatggccatgctg
tgcagccctgtgctctatggcagccacaccagcctgcaggagttcctgcgccagctgctc
accttctacaaggtggtgggcggctgccaggagcgcagccaaggctgcttccccgtgtac
ctggtctacagtgacaagcgcatggtgcagacagccgccggggactactcgggcaacatc
gagtgggccagctgcacgctgtgctctgccgtgcggcgctcctgctgtgcaccctctgag
gctgtcaagtccgctgccatcccctactggctgctgctcacaccccagcacctcaacgtc
atcaaagccgacttcaaccccatgcccaatcgcggcacccacaactgccgcaaccgcaac
agcttcaagcttagccgtgtgccgctctccactgtgcttctggaccccacacgcagctgc
actcagccgaggggcgccttcgcagacggccacgtgcttgagctgcttgtgggctaccgc
tttgtcaccgccatcttcgtgctgccccatgagaagttccacttcctgcgcatctacaac
cagctgcgggcctcactgcaggacctgaagactgtagtcatcgccaagacccctgcaacc
gggggcaggcctcagagcccccctgtggatggccaggctgccgaggacggggcccgatgc
agcaatgagcagcatctccaggaggtcccggcagaggctccagctccagccccagcccca
gccccagcggagatcccagctctaaccccagcaaagaccccagctccggcagagccctca
gtgccagctttggtcccagcggaggccccagcctcagcagagacccctttggaggcctca
gtgggggcctcagccccggcagcggaggccccagcacaagtggaggcccccgcccagtac
ccaagtgagcacttgatccggtccacgtcagaggagaatcagatcccttcgcacctgccc
gcctgcccgtcgctccggcacatcgccagcctgcaggggagcgccatcgtcgagttcttc
cacagcagcgttgccgaggtggaaaacgaggagctgcggcacctcctgtggtcgtcggtg
gtgttctaccagaccccggggctagaggtgaccgcctgcgtgctgctctccactaaggcc
gtgtactttgtgctgcacgatggcctccgccgctacttctcggagccgctgcaggatttc
tggcatcagaaaaacgccgactacaacaacagtcccttccacatctctcagtgctttgtt
ttaaaactcagcgacctgcatgtagtcaacgttggactctttgaccagtatttccggctg
acgggctcctctccggcgcaggtggttacatgcttgacacgggacagctacctgacacac
tgcttcctccagcacctcatggccgtgctctccttgctggaacgcacaccctcacctgag
cctgtcgacaaagacttctactctgagtttggaaacaagaccacagggaagatggagaac
tatgagctgatccactcaagccgtgtcaagttcacctaccccagtgaagaggaggtcggg
gacctgacattcactgtggcccagaaggtggctgacccagagaaggcgccatccctcagc
atcctgctgtacgtgcaggccttccaggtgggcacaccactatctgggcgctgcaggggc
atgttgcgccccaaaacgctcctgctcaccagcgccgagatcttcctcctggacgaggac
ttcgtccactacccgctgcccgagttcgccaaagagccgccacagagggaccggtaccgg
ctggacgacggccgccgcatccgggacctggaccgcgtgctcatgggctaccagacatac
ccacaggccctcaccctggtctttgacgacgtgcagggccacgacctcatgggcagcgtc
accctggaccactttggggaggtgccaggtggcccggctagaggcggccagggccgtgag
gtccagtggcaggtgtttgtccccagcgctgagagccgagagaagctcatctcgctgttg
gcccgccagtgggaggccctttgtggccgggagctgcccgtggagctcactggctag
DBGET
integrated database retrieval system