Phocoena phocoena (harbor porpoise): 136128965
Help
Entry
136128965 CDS
T11058
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
136128965 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136128965 (XPC)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
136128965 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
136128965
NCBI-ProteinID:
XP_065741088
LinkDB
All DBs
Position
10:complement(3203386..3238471)
Genome browser
AA seq
750 aa
AA seq
DB search
MMKRFNKEVREDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIVPTRFTKVPPQDVDVS
YLSNLAKWFIGTFTVNADLSSNEQDGLQTTLERRFAIYSARDSEELVHIFLLILRALHLP
TRLVLSLQPVPLKLPAAKGKKPSKERSTEGPGGSSETSSQVPGKPSKPETSRGSRQEDMS
SEGTGSAPDKAKGSKAAATRKKRREPSSSRKEEGKAGGQTEGTQRRSRGRERQAAARVSY
KEESGSDKASSSSDFELSSSDSHRPSDEDSEPGLPRQRRAAAPQRMKVGSKRESRSQRGS
DRQPPGFPEASVSASGSKRKRGKRKMPVDGEEADGRRAAGVDQWLEVFSEQEEKWVCVDC
VHGVVGQPLTCYQYATKPVTYIVGIDSDGWLRDVTQRYDPAWMTVTRKCRVDAAWWAETL
QPYRSPLVEREQQEDQEFQARHLDQPLPTVIGMYKNHPLYALKRHLLKYEAIYPETAAIL
GYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKVVKGYSNRARRARLAEPQLQDY
NDLGLFGKWQTEEYQPPVAVDGKVPRNEFGNVYLFLPGMMPVGCVQLHLPNLHRVARKLN
IDCAQAVTGFDFHKGYSHPITDGYIVCEEYKDVLLAAWEDEQALIEKKEKEKREKRALGN
WKLLVKGLLIRERLRLRYGAQSEEAAPHADAGGGLSSDEEEGTSSPAEVARILAASWPQN
REVEEKRKCPRKSRREEKEAASHLFPFEKL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgtttcaataaggaagtccgtgaggacacacacaaggttcaccttctgtgt
ctgctggcaaatggcttctatcgaaatagcatctgcagccagccagatctgcgtgccatc
ggcctctccatcgtcccgactcgctttaccaaagtgccgcctcaagacgtggacgtcagc
tacctgtcaaacctggcgaaatggttcattggaacatttacagttaatgcagacctttca
agcaatgagcaggatggcctgcagacgacgctggagagaaggtttgctatttactctgcg
agagacagtgaagagttggtccacatatttctgctgattctccgggccctacatctccct
acccgactcgtattgtctctacagccagttcctctgaagttaccagcagcgaagggaaag
aaaccttccaaggagagatccacagagggtcctggaggctcctcagaaacttccagccaa
gttcctggaaagccaagcaaaccagagaccagcagaggaagcagacaagaggacatgtct
tctgagggcactggcagtgcacctgacaaagcgaaggggagcaaggcggctgccaccagg
aagaagcggagagagccctcctccagcaggaaagaagagggcaaggccggggggcagacg
gaggggacccagaggcgttcgcggggccgggagcggcaggcggccgccagggtgtcttac
aaagaggagagcgggagtgacaaggccagcagcagctctgactttgagctctccagctcg
gacagccatcgcccatccgacgaggattctgagccaggccttccaaggcagaggagggcc
gccgcccctcagaggatgaaggtggggtccaagagggagtccaggtcccagcgtggaagc
gaccgtcagccccctggctttccagaagcatctgtaagcgcttccggcagtaagcgtaag
agaggcaagcgtaagatgcccgtggatggtgaggaggcagacggccggagagcagctggt
gtggaccagtggctggaggtattctctgagcaggaggagaaatgggtgtgcgtggactgt
gtgcacggtgtagtgggccagcccctgacctgctaccagtacgccaccaagcctgtgacc
tacatcgtgggcatcgacagcgacggctggttgcgcgacgtcacacagaggtacgaccct
gcctggatgacggtgacccgaaagtgccgggttgatgccgcgtggtgggccgagaccctg
caaccctaccggagcccgctggtggagagggagcagcaggaggaccaggagtttcaggcg
aggcacctggaccagcctctgcccaccgtcataggcatgtacaagaaccaccctctgtac
gccctcaagaggcacctcctcaagtacgaggccatctaccctgagacggctgccatcctc
gggtactgccgtggagaggctgtctactccagggactgcgtgcacacgctgcactccagg
gacacgtggctgaaacaggcccgagtggtgaggcttggagaagtgccctacaaggttgta
aaaggctattccaaccgggcccggagagcccgcctggctgagccgcagctgcaggactac
aatgacctgggcctgtttggcaagtggcagaccgaggagtaccagccgccggtggctgtg
gacgggaaggtcccccggaacgaattcggcaacgtgtacctcttcctgcccggcatgatg
cccgtcggctgcgtccagctgcacctgcccaacttgcaccgcgtggcccgaaagctgaac
atcgactgtgcccaggctgttacgggcttcgatttccacaaaggctactcccatcccata
accgatggctacatagtctgtgaggaatacaaagatgtgctcctggccgcctgggaggac
gagcaggcgctcattgagaagaaggagaaggagaaaagggagaagcgggctctgggaaac
tggaagctgctggtcaaagggctgctcatccgggagcggctgaggcttcgctacggggct
cagagtgaggaagccgctccccacgcagacgcaggaggaggactctcttcagacgaggag
gaggggaccagctctccagcggaagtggccaggatcctggcagcctcctggccccaaaac
cgagaggtagaggagaagcgcaagtgcccccggaagagcaggagggaggagaaggaggca
gcttcccacctgttcccgtttgagaagctgtga
DBGET
integrated database retrieval system
