Phocoena phocoena (harbor porpoise): 136129084
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Entry
136129084 CDS
T11058
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136129084 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136129084 (PEX6)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
136129084 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_lid_3
AAA_5
AAA_33
AAA_22
nSTAND3
RuvB_N
AAA_11
NPHP3_N
AAA_25
TsaE
TIP49
nSTAND_NTPase5
Mg_chelatase
RNA_helicase
AAA_28
AAA_30
AAA_14
IstB_IS21
PEX6_4th
Vps4_C
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
136129084
NCBI-ProteinID:
XP_065741241
LinkDB
All DBs
Position
10:complement(72758445..72770268)
Genome browser
AA seq
980 aa
AA seq
DB search
MALAVLRVLEPFPTETPPLAVLLPPGGPWPAAGLGLVLALRPAGESPAGPALLVAALEGP
GAGTEEQGPGPPQLLVSRALLRLLALGSGAWVRARPVRRPPALGWALLGTSSGPGLGPRV
GPLLVRRGETLPVPGPRVLETRPALQGLLGPGTRLAVTELRGRAKLGPETEDSSRPPPPP
VVSSFAASGTVRRLRGVLGGTGDALGVSRSCLRSLSLFQGEWVWVTRAGESSNTSQPHLA
TVQVLEPRWDVCERLGPSSGQLGEPLADGLALVPATLAFNLGCDPLEVGELKIQRYLEGS
STPEDKGSCSVLPGPPFAKELHIEIVSSPHYSTNGTYDHVLYRHFQTPRAVQEGDVLCVP
TVGQVEILEGSPEKLPRWREMFFKVKKTVGEAPDGPTRAYVADTTHTSLYLVGSTLSLVP
RLPSGESTPWSSLSPPGLEGLVTELCAALKPRLQPGGALLTGTGSVLLRGPPGSGKTTAV
AAACSCLGLHLLKVPCSSLCADSSGAVETKLQATFSRAGRCRPVVLLLTAVDLLGRDRDG
LGEDARVVATLRRLLLDEDPLPSCPPLMVVATTSRAQDLPVDVQTAFPHELEVPVLSEGQ
RLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNLGWAGGLS
AEDEGELCAAGFPLLAEDFGQALEQLQSAHSQAVGAPKIPLVSWHDVGGLQEVKKEILET
IQLPLEHPELPSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVRQVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQ
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFRLEPSVSLVD
VLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEEGLEPGSSALLLTTEDLLQAAARLQP
SVSEHELLRYKSIQRKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcagtcttgcgggtcctggagcccttcccgacggagacacccccattggcg
gtgctgctgccgcccgggggcccgtggcctgcggcggggctgggcctggtgctggcgctg
cggcctgccggggagagcccggcagggccggcgctgctagtggccgccctggagggaccg
ggcgcgggcaccgaagagcaggggccggggcctccgcagctgctggtgagccgcgcgctg
ttgcggctcctggccctgggctccggggcatgggtgcgggcgcggccggtgcggcggccc
ccggcgctgggctgggcgctgctcggcacctcgtctgggcccgggctcggaccgagagtc
gggccgttgctggtgaggcgcggagagaccctgccagtacccggaccgcgggtgctggag
acgcggccggcgttacaagggctactgggcccagggacgcgactagctgtgactgagctc
cgtgggcgggccaaactgggtccggagactgaggacagcagccggcccccacccccgccg
gtggtgtcctccttcgcggcctctggcacagtccggcgactccggggagttctgggaggg
actggagatgcattgggggtgagccggagctgtctccgtagcctcagcctcttccagggc
gaatgggtgtgggtgacccgggctggagagtcatcgaacacttcccagccacacttggcc
acggtgcaggtcctagagcctcgctgggacgtctgtgaaaggctgggacccagctctggg
cagctgggagagcccctcgctgacggactggccctcgtgcctgctactctggcttttaat
ctcggctgtgatcccctggaggtgggagagcttaaaattcagagatacttggagggctcc
agcacccctgaagacaaaggaagctgctcagtgctgcctgggcctccgtttgccaaagag
ttacacatcgaaattgtgtcctctcctcactacagcactaatggaacgtatgaccatgtt
ctttaccggcactttcagacacccagggcagtccaggaaggggatgttctgtgtgtgcca
acagtcggacaagtagagatcctggaaggaagcccagagaaactgcccaggtggcgggag
atgttttttaaagtgaagaaaacagttggggaagctccggatgggccaaccagggcctac
gtagctgacaccacccacacctccttgtacttggtgggttctaccctgagccttgttcca
aggctcccttcaggtgaatccaccccctggagcagcttgtctcctccaggcctggagggc
ttggtgactgagctctgtgctgccctgaagcctcgcctccagccagggggtgccctgctg
acaggaacaggcagtgtccttctacggggccccccgggcagtgggaagaccactgcagtc
gctgccgcctgcagctgcctcgggctccacttactgaaggtgccctgctccagcctctgt
gcagacagtagcggggctgtggagacaaaactgcaggccactttctcccgggccgggcgc
tgccggcctgtggttctgttgctgacagctgtggacctgctgggccgggaccgtgatggg
ttaggcgaggatgcccgtgtggtggccacactgcgtcgcctcctcctggatgaagacccc
ctccccagctgccctcccctgatggtcgtggccaccacaagccgggcccaggacctgcct
gtggatgtgcagacagcgtttcctcacgagctggaggtgcctgtgctgtcagaggggcag
cggctcagcatcctgcgggccctcactgcccacctcccactgggccaagaggtgaacctg
gcgcagctggcacggcggtgtgcaggctttgtggtaggggatctctatgcccttttgacc
cacagcagccgggcagcctgcaccaggatcaagaacttgggctgggcaggtggcttgagt
gcggaggatgagggggagctgtgtgctgctggctttcctctcctggctgaggactttggg
caggcgctggagcagctgcagtcagctcactcccaggccgtcggagcccccaagatcccc
ctggtgtcctggcacgatgtgggcgggctgcaggaggtgaagaaggagattctggagact
attcagctccctctagagcaccctgagctgccgagcctgggcctgaggcgctccggcctt
ctgctccacgggccccctggcacgggcaagaccctcctggccaaggcagtggccactgag
tgcagcctcaccttcctcagcgtgaaggggcccgagctgatcaacatgtacgtgggccaa
agcgaggagaatgtacggcaagtgtttgccagggccagggccgcagctccatgcatcatc
ttctttgatgaactggactccttggccccaagccgggggcgaagtggagactctggaggt
gtgatggacagggtggtgtctcagctcctggccgagctggacgggcttcacagcactcag
gatgtgtttgtgattggagccaccaacagaccagacctcctggaccctgcccttctgagg
cccggcaggtttgacaagttggtgtttgtaggagtgagcgaggaccgcgcctcccagctg
cgtgttctgagcgccatcacgcgcaaattcaggctcgagccctctgtgagcctggtggac
gtgctggaccactgcccaccccagctgacgggcgcagacctctactccctatgctccgat
gccatgacagctgccctcaaacgcagggttcgggacctggaggaaggcctggagcccggg
agctcggcactgctgctcaccacggaggacctgctacaggctgcagcccggctacagccc
tcggtgagcgagcacgagctgctccggtacaagagcatccagcgcaagtttgctgcctgc
tag
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integrated database retrieval system
