Phocoena phocoena (harbor porpoise): 136129135
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Entry
136129135 CDS
T11058
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
136129135 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136129135 (BHLHE40)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
136129135 (BHLHE40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
136129135
NCBI-ProteinID:
XP_065741318
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Position
10:complement(11270473..11275535)
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AA seq
412 aa
AA seq
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MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTTRKPSDPGAKAMDFKEKPSSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKTELRVEQPYFKSDHGRRFTMGERIGAIKQESEEPPTKKSRMQLSDDEGH
FTSSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTSFMNPDKISAPLLMPQRLPSPLPAHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagtgcgcaaccgccccccgcttgcctgcccaaagcgccaggactg
gagcccggagacctaccagggatggattttgcccatatgtaccaagtgtacaagtcgcgg
cggggaataaagcggagcgaggatagcaaggagacctacaaactgccgcaccgcctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtagttcttgaacttacc
ttgaagcatgtgaaagcactaacaaacctaattgatcagcaacagcagaaaatcattgcc
ctgcagagcggtttgcaagctggtgatctgtcggggagaaatgtcgaagcaggtcaagag
atgttctgctcaggtttccagacatgtgcccgggaggtgcttcagtacctggccaagcac
gagaacacccgggacctgaaatcttcccagctcgtcacccacctccaccgtgtggtctcc
gagctcctgcagggtggtaccaccaggaagccgtcagacccaggtgccaaagccatggac
ttcaaggagaaacccagctccctggccaaaggctctgaaggcccaggcaaaaactgtgta
ccagtcatccagcggactttcgctcactcgagcggcgagcagagtggcagtgacacggac
acagacagcggctacggaggagaatcagagaagactgagctgcgtgtcgagcagccgtac
ttcaaaagtgatcatggacgcaggttcaccatgggagaaaggatcggtgctattaagcaa
gaatccgaagaaccccccacgaaaaagagcagaatgcagctctcagatgatgaaggccat
ttcactagcagtgacctgatcagctccccgttcctgggcccacacccgcaccagcctccc
ttttgcctgcccttctatctgatcccaccgtcagcgactgcctacttgcccatgctggag
aaatgctggtatcccacctctgtcccagtgttatacccaggcctcaacgcctctgccgca
gctctcaccagcttcatgaacccagacaagatctcagcccccttgctcatgccccagaga
ctcccttctcccttgccagcccatccggccatcgattcttccgccctgctccaagctctg
aagcagatcccccctttaaacttagaaaccaaagactaa
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