Phocoena phocoena (harbor porpoise): 136129158
Help
Entry
136129158 CDS
T11058
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc03250
Viral life cycle - HIV-1
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136129158 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136129158 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136129158 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136129158 (NUP153)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136129158 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
136129158
NCBI-ProteinID:
XP_065741361
LinkDB
All DBs
Position
10:91759344..91835442
Genome browser
AA seq
1477 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFH
KSEDVCSCSTDTREVAQWPENREDDHIIYADEENPNIHDGRITPEPTVSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSVPPLWSPEAERSHSLSQHTATSSKKPAFNLSVFGTL
SPSLGNSSVLKTSQLGDSPFYPGKTTYGGAAAAVRQSKLQNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLVDAKRIPSVFSSPLNSPLDRSGIDATTNFQARREKVD
SQHPPVQRLMTPKPVSIAANRTVYFKPSLTPSGELRKTNQRIDKKHSTGYEKNMTPGQNR
EQRESGFSYPDFSVSAANGLSSGVGGGGGKMRRERTRFVASEPQEEEEIEVPVLPKISLP
ITSSSLPTFNFSSSVITTSSPSPATPSQSLTNQVQMTSPNSTGSPLFRFSSPIVKSTEAD
VLPPSSIGFTFSVPVAKTAERCGTSGASEPLTRSSAQDITAVNSPSCKKKPDEDFKGPFK
PAKTLKEGSVLDVLKNPGFTSPKADSLAAQPTTTSLVVYSRPAISSFSSSGIGFGESLKP
GSSWQCDTCLLQNKVTDNKCVACQAAKLPPKDTAKQTGAGAPSKSGKPTVSAPETGFGDK
FKPAVGTWDCDTCLVQNKPEAIKCVACETPKPGTGVKRVLTLPVASESAVTVAASSSSCT
ETTGALGFTDKFKRPVGSWECPVCCVSNNAEDNKCVSCMSQKPGSSIPASSSSTVSVSLL
SGGCLGLDKFKKPEGSWDCEVCLVENKADSNKCVACESAKPGTKSEFTGFSPSSSSSNPA
TSSFKFGIPSSSSGPSQTLTNTGNFKFGDQGGFKIGVSLDSGSVTPLSEGFKFSKPIGDF
KFGVSSDSKPEEVKKDSKNDNNFKFGLASGLSNPPSLAPFQFGVSSLGQQEKKEEPPKSS
SAGFGFGSGVINPPLAATDTTVTSESKSSFSFGTVDTKSVPGAPFTCQTPEAKKEETPAS
KGGFAFGSVDPAPLPSASLFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCPPVFSFGNS
EQTKDEGSSKSSTFSFSMAKPSEKESEQPTKATFAFGAQTSTTADQGTAKPVFSFLNNSS
SNSSTPATSAGGGIFGSSTSSSSAPAAAFVFGQANSPVSSSAFGNSAESSTSQSLLFSRE
SKPATTSSAGTAVAPFVFGPGASSSDTAASGFSFGAPTTSSSAGSSFVFGTGPSAPSASP
AFGANQTPAFGQNQGASQPNPPGFGSLSSSAALFSAGSQPAAPTFGTVSSSSQPPVFGQQ
PSQSAFGSGTAPNSSSVFQFGSSATNFNFTNNNPSGVFTFGANASTPAASAQPSGSGGFQ
FSQSPAAFSVGSNGKNSFSPGTAVSGRKIKTAVRRRK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagctggaggcataggagggggcggtggcggcaagatccggactcggcgt
tgccaccaggggccaattaaaccttaccagcaggggcgacaacagcaccagggcattctc
agcagggttacagaatctgttaagaatattgtgccaggatggttacagagatacttccac
aagagtgaagacgtatgtagctgctcaacagacacaagagaggtggcacagtggccggaa
aatagggaagatgaccatataatatatgctgatgaggagaaccctaacattcatgatggg
agaatcactcctgagccaacagtcagtaatacagaagaaccctcaacaactagtactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagccatctgaatttctcc
atgttggaatctcctgcgttacactgtcagccctccacatcttcggcattcccaattggc
agttctggattttccctcgtaaaggaaattaaagattctacctctcagcatgatgatgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagctgtttca
aagaacacttcagtgccacctctgtggtccccagaggctgaacgttctcattcactctca
cagcacactgccaccagctcaaaaaaaccagcattcaacttgtctgtctttggaacactt
tctccttcacttgggaattcttcagttcttaaaacaagtcagcttggagattctcctttt
taccctggaaaaacgacctatggtggggcagcagctgctgtaagacagtctaaactacaa
aacacaccctatcaggcaccagtcagaagacagatgaaagctaagcaactgaacgcacag
tcctacggtgtgactagttcaacagcccggaggatattgcagtctttagagaagatgtca
agccctctagtggatgcaaaaagaattccatctgttttttcttctcctctgaattcccct
cttgataggagtgggatagatgccaccacaaattttcaggccagaagggaaaaggtggac
tctcaacacccccctgttcagagactcatgaccccaaagccagtttccatagcagcaaat
cgaactgtttattttaaaccatctctgaccccatctggtgaattaaggaagactaatcaa
agaatagataaaaagcacagtactggatatgaaaaaaatatgacaccaggacaaaataga
gaacagcgagaaagcggcttttcttacccagatttcagtgtgtctgcagccaatggtttg
tcttctggagtaggtggtggaggtgggaagatgaggcgagagaggacacgctttgtggca
tctgaacctcaagaagaggaggaaatagaagtcccagtattaccgaaaatctctctaccc
atcaccagttcttcactgcctaccttcaattttagttcttctgtgattacaacttcctct
ccatcacccgctactccttcacaatcattaacaaaccaggtacaaatgacctctccaaac
agcactggcagccccttgtttagattttcatctccaattgtaaagtctactgaggcagat
gtactacctccatcatctattggatttacgtttagtgtgcccgtggcaaagacagcagaa
cgttgtggcactagtggtgcctcagagccacttacaaggagttcagctcaagatatcact
gcagtgaacagtccaagctgtaagaagaaaccagatgaagatttcaagggccctttcaaa
cctgcaaaaaccctgaaagaaggaagtgtcctagatgttctgaagaaccctggtttcaca
tcaccaaaggcagattctcttgctgctcaacctaccaccacaagcctggtagtttattca
agaccagcaataagtagcttttcttctagtggaattgggtttggggaaagtttaaaacct
gggtcatcgtggcagtgtgatacctgtctactccagaacaaagttacagacaacaaatgt
gtagcctgtcaagcagcaaaattgccgccaaaagacactgctaaacagactggagctggg
gcaccaagtaaaagtggcaaaccaactgtttctgcaccagagacaggctttggagacaaa
tttaaaccagcagtaggaacttgggattgcgatacctgtttagtgcaaaataaacctgaa
gcgataaaatgtgtagcttgtgaaacaccgaaaccgggaactggtgttaagcgagtcctt
acgttgccagtggcttcagaaagcgctgttactgtggctgcttcctcctccagctgcact
gagaccactggtgccttaggatttacagataaattcaaaaggcccgtgggatcttgggag
tgtccagtgtgctgtgtttctaataatgcagaagacaataaatgtgtgtcctgtatgtct
cagaaaccaggaagttcaatacctgcttcaagtagcagcactgtctctgtctctctgttg
tctggaggctgcctaggattggacaagttcaagaaacctgagggaagctgggactgtgaa
gtgtgcctagtggagaataaagcagattctaacaaatgcgtagcatgcgagagtgcaaag
ccgggcacaaagtctgagtttacaggcttcagcccatcttcctcatcttcgaacccagca
acctcatccttcaaatttggtattccatcatcctcttctgggccttctcagactttaaca
aacactggaaattttaaatttggagatcaaggaggtttcaaaataggtgtgtcactagat
tctgggtctgtaacccctttgagtgaaggctttaaattttctaaaccaataggagatttt
aaatttggagtttcatctgattctaaacctgaagaagttaaaaaagatagtaaaaatgat
aataattttaagtttggacttgcttctggtttaagcaatccgccttctttagctccattt
cagtttggggtgtctagtcttgggcagcaagaaaagaaagaagaaccgccgaaatcttca
tctgcaggctttggctttggttccggtgtcattaaccctccccttgctgctactgacacc
acagtgacctctgagagcaagagcagcttcagttttggaaccgtggacaccaagagtgtc
ccaggggctcctttcacatgtcagacgccagaagcaaaaaaagaagaaacccctgcctcc
aaaggagggttcgcttttggcagcgtggaccctgcccccctgccatctgcctcgttgttt
gttttgggaaggacagaagagaaacagcaagagcctgtcacgtctacatctctagtgttt
gggaaaaaagctgacagtgaagagccaaagtgtccaccagtgttttcctttgggaactca
gagcaaaccaaagacgagggttcttccaagtcttcgacctttagtttcagtatggcaaag
ccatctgagaaggaatctgaacagccaacgaaggccacttttgcttttggagctcaaacc
agtactacagctgatcaaggtacagcaaagccagttttcagtttcttgaacaacagttcc
tctaattcaagtacaccagccacttcagctggtggtggcatatttggtagttccacctca
tcctccagtgcgcctgcggctgcctttgtgtttggacaggccaacagtcctgtgagcagc
tctgcctttgggaactctgccgaatccagtacatctcagtctttgctattttctcgagag
agcaaaccagcaaccacgtcgagcgcgggcacagccgtcgccccatttgtctttggtccg
ggtgccagcagcagtgatactgccgcctctggtttcagctttggagctcccaccacatca
agctctgcaggatcctcctttgtattcggcactggaccttcagcaccatctgccagtcca
gcgttcggtgctaaccagaccccagcatttggacaaaaccaaggtgccagccagcctaac
cccccaggctttgggtctctgtcatcttcagcagcattattttctgctggctctcagcct
gcggcacctacttttgggacagtgtcgagcagcagccagcctcctgtgtttggacagcag
cctagtcagtctgcatttggctcaggaacagctcctaattccagttctgttttccagttt
ggcagcagcgctacaaatttcaacttcacaaacaataatccatcaggagtgttcacgttc
ggggcaaatgccagcacacctgcagcctcagcccagccctctggctcggggggctttcag
tttagccagtctccagcggcgttttctgtggggtcaaatgggaaaaactcattctctcct
ggaactgcagtttctggtcgcaagataaagactgctgttagacgcaggaaataa
DBGET
integrated database retrieval system
