Phocoena phocoena (harbor porpoise): 136129280
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Entry
136129280 CDS
T11058
Symbol
IRF4
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
136129280 (IRF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136129280 (IRF4)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
136129280 (IRF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
136129280
NCBI-ProteinID:
XP_065741557
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Position
10:complement(105189297..105202180)
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AA seq
451 aa
AA seq
DB search
MNLEGSSRGGEFGMSSVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISE
PYKVYRIVPEGAKKGAKQLTLEEPQVPMSRPYSMPAPYCSLPAQQAHTYMIPPHDRGWRE
FVPDQPHPETPYQCPVTFGPRSHHWQGPACENGCQVTGTFYACAPPESQAPGIPIEPSIR
SAEALALSDCRLHICLYYREVLVKELTTSSPEGCRLSHAHTYDASSLDQVLFPYPEDNGQ
RKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRVYWDGPLALCSDRPNKLERDQACKLFD
TQQFLSELQAFAHHGRPLPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN
SGHFLRGYDLPEHVSSPEDFHRPIRHSSIQE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggagggcagcagccgaggcggcgagttcggcatgagctccgtgagctgcggc
aacgggaagctccgccagtggctgatcgaccagatcgacagcggcaagtacccggggctg
gtgtgggagaacgaggagaagagcatcttccgcatcccctggaagcacgcgggcaagcaa
gactacaaccgcgaggaggacgccgcgctcttcaaggcttgggcgctatttaaaggcaag
tttcgggaaggcatcgacaagccggaccctcctacttggaagacgcgtctgcgatgcgct
ctgaacaagagcaacgacttcgaggagctggtggagcgcagtcagctggacatctctgag
ccctacaaggtgtacaggatcgtgcctgagggggccaagaaaggagcgaagcagctgacc
ctggaggagccacaggtgcccatgagccgcccgtacagcatgccggctccttactgctca
cttccagcccagcaggctcacacctacatgattccgccccacgaccgaggctggagagag
ttcgtccctgatcagccccacccggagactccgtaccagtgtcctgtgaccttcgggcct
cgcagccaccactggcaaggcccagcctgtgaaaacggttgccaggtgacaggaaccttt
tatgcttgtgccccgcccgagtcccaggcccccgggatccccatagagccaagcataagg
tctgccgaagccttggccctctcagactgccggctccacatctgcctgtactaccgggaa
gtcctggtgaaagagctgaccacatccagccccgaaggctgccggctctcccacgcccac
acctatgacgccagcagcctggaccaggtcctctttccctacccggaggacaacggccag
aggaagaacatcgagaagctgctcagccacctggaaaggggcgtggtcctctggatggcc
cccgacgggctttacgccaagaggctgtgccagagcagggtctactgggacgggcccctg
gcactgtgcagcgaccggcccaacaagctggagagagaccaggcctgcaagctctttgac
acgcagcagttcttatcagagctccaagcctttgctcaccatggccggcctctgccaagg
ttccaggtgacgctgtgcttcggggaagagtttccagatccccagaggcaacggaagctc
atcactgctcacgtcgaacctctgctagccaggcagctgtattattttgctcagcaaaac
agtggacatttcctgagaggctacgacttacctgagcacgtcagcagccccgaggatttc
cacaggcccatccgccactcctccatccaagagtga
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