Phocoena phocoena (harbor porpoise): 136129298
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Entry
136129298 CDS
T11058
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136129298 (TRAIP)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136129298 (TRAIP)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136129298 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
CEP135_TSGA10_CC
zf-RING_Vps41
zf-RING_11
zf-C3HC4_3
zf-RING_16
FAA_hydro_N_2
FAR1_N
zf_RING_Vps8
PMD1-like
WEMBL
OVT1
CCDC171
MscS_porin
Rod_CreS
HIP1_clath_bdg
Prok-RING_1
Zn_ribbon_8
HmpF
RINGv
zf-RING-like
CCDC39
FANCL_C
GAS
Motif
Other DBs
NCBI-GeneID:
136129298
NCBI-ProteinID:
XP_065741577
LinkDB
All DBs
Position
10:38362425..38388725
Genome browser
AA seq
471 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIIN
KLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDGQLIIDTLRDTLEERNATVES
LQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRNKMKTMERIELLLQSQRSEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSRSKLQTVY
SELDQAKLELRSAQKDLQSADKEIASLRKKLMMLQETLNLPPVDSEAVNRLVLESPAPVE
MLNLKLHRPAFGDDIDLNATFNVDTPPAQPSSTQHGHAKRLFPEKAHSPVQDVLKKMPKG
PKQESQLLLGGQRCLGEPDEELAGAFPVFIRNAVLGQKQTKRTRAEPCRSTDAVRTGFDG
LGGRTKFIQPTDTTMIRSLPVKSKPKARAKQRLGARAVLPPSQAKLDTFLW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgctctgtgtaccatttgctccgacttcttcgatcactcccgcgacgtg
gccgccattcactgcggccacaccttccacttgcagtgcctaattcagtggttcgagacg
gcaccaagtcggacctgcccgcagtgccgaatccaggtcggtaaaagaaccattatcaat
aagctcttctttgaccttgcccaggaggaggagagtgtcttagatgcagaattcttaaag
aatgaactggataataccagagctctgctttcccagaaagagaaggaaaaacgagacggc
cagcttatcattgacactctgcgggacacgctggaagaacgcaacgccactgttgaatcc
ctgcagaaggccttagacaaggctgagatgctgtgctccaccctcaagaagcagatgaag
tacttggaacagcagcaggatgagaccaaacaagcacgggaggaggcccgccggctccgg
aacaagatgaagaccatggagcgaattgagctcctactccagagtcagcggtccgaggtg
gaggagatgatccgtgacatgggtgtgggacagtcagcggtggaacagttggctgtgtac
tgcgtgtccctcaagaaagagtacgagaatctaaaagaggcacggaaggcctcaggggag
ctagccgacaaactgaagaaggatttgttttcttccagaagcaagttgcagacagtctac
tctgaactggaccaggccaagttggagctgaggtcggcccagaaggacttacagagtgct
gacaaggaaatcgcaagcctgagaaaaaagctaatgatgctgcaggaaaccctgaacctg
ccaccagtggacagtgaggctgtcaaccgcctggttttagagagcccagctcctgtggag
atgctgaacctgaagcttcaccggccagccttcggcgatgatattgacctcaatgccacc
tttaatgtggatactcccccagcccagccctccagcacccagcatggccatgccaagagg
ctcttcccagagaaggcacattctcccgttcaggacgttctcaagaagatgcccaaaggc
cccaagcaggagtcccagctcttgctgggtggccagcgctgtctgggagagcctgatgag
gagctggctggtgccttccctgtcttcatccggaatgctgtcctgggccagaaacagacc
aagaggaccagggcagagccctgtcgcagcacagatgcagtaaggactggcttcgatgga
cttggaggccggacaaaattcatccagcctactgacacgactatgatccgctcactgccc
gttaaatccaagcccaaggccagggctaagcagagactgggggccagggcagtgctccct
ccctcccaggccaagctggacaccttcctgtggtag
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