Phocoena phocoena (harbor porpoise): 136129676
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Entry
136129676 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: POM121-like protein 2
KO
K14316
nuclear pore complex protein Nup121
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136129676
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136129676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136129676
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136129676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
ORC3_N
Motif
Other DBs
NCBI-GeneID:
136129676
NCBI-ProteinID:
XP_065742065
LinkDB
All DBs
Position
10:84023384..84037702
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AA seq
754 aa
AA seq
DB search
MGTYVGKLGLWPSSQAGGRTDLSERPLNRRPAQPLHQVPWVQQVHRAHPAPRHRPARSLP
NWDPTSPNACVVNEAWRRFRMNRSQNSIVGPLPSDWWESYFKGSIWSLRHPRATWSPVTR
RLAPREPPSTAPAEVANSAGVSPSEKXPDPCAKETVLRALGECKKGKVRWEEPLFHESLD
SKRRIPETRLSAFKPLTKNGVLTSFVPRPGPLKRSLDCWGSGHSSNNRPSCSSMDSLAST
HTGGPLSSQRNAITSSYSSSRDFSEAWKRSIPSTXLQIPEWPIKRKEHGHPSHSPVPLVS
DESPETSGSSGQQNQIPLLLSSPWSLLSLTPPPQLGYAVPEDLALGKKAGLQRSNKARED
TTEVTTDSVPDTWSAIQPPLSQGTDPQLESLHKMQKSPSPLAFPQPTGEAICVAHSPLKT
ASLLASRGCSQSEPLSGTSSDSKPTTTFILLTLVSPTAPVTDTTWPLASQAAIPRDSPAI
YPAAPTMQSTLFGLMSSPAPHLPASALLLQLLSALIRVSLLRCFHNAVKAKPPLLRKPRL
RAGIRRPTRLSHLGLPGRGGRSLPRVVLWAQRPVAYGNQSRLLRNSEGHFKGDHRNVHNL
TLSGFNLIPQIWRKVQSHTANMEKGSHRDTYTQIQIKEALRKKKRRRKNKKKERKNQCGS
TSVFTNISFTGLPLNPFRIERREALTEAMVNLGRLGLCGPDIGAGPDHHALHIPCRSLLS
RTATSRRALVRQFQNAGVPLRPKTNVYFSRSSDT
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttacgtgggcaagctgggactctggccgtcatcccaagcaggggggcgcaca
gacttgtcggagaggcccttgaaccgccggccagctcagccccttcatcaggttccctgg
gttcagcaagtccatcgtgcccaccctgcccctcggcacagacctgcgaggagcctgccg
aactgggatcctaccagtcccaacgcgtgcgtggtcaatgaggcttggaggcgctttcgc
atgaacaggtcccagaattccatcgtggggcctcttccctcagactggtgggaaagttac
ttcaaggggagtatctggtctcttcggcaccccagggcaacatggagcccggtgaccagg
aggctcgctcctcgtgagcccccctccactgccccagcagaggtagcgaactctgcaggg
gtctcaccttctgagaagnccccagacccatgtgcgaaggagacagtgctgagggccctc
ggagagtgcaagaaggggaaagtcagatgggaagaaccacttttccatgagagcttggac
agtaagagaaggattccagagaccagactatctgcgtttaagcctctgacgaaaaatgga
gtcctcacttcttttgtacccaggcctgggcctctgaagagaagcctcgactgctggggc
tcaggtcacagctcgaataacaggcccagctgctcctccatggactccttggccagcaca
cacacaggtggcccccttagctcccaaagaaatgctattacaagctcttacagctcttct
agagatttctctgaggcttggaagagaagtattcccagtacataactccagataccagag
tggccaataaaaaggaaagaacatggtcatccgtctcactctccagtcccactggtatca
gatgagtccccagaaacatctggcagctctgggcagcaaaatcagattcccctgcttctg
tcaagcccctggagcctgctgtccctgactccgcctcctcagctgggttatgcagtcccc
gaagacctggccttagggaagaaagctggactccaacggagcaacaaagccagagaagat
acgactgaggtcaccacagactctgtccctgacacttggtctgctattcagcctcccctg
tcccagggcactgatcctcagctggaaagcttacataaaatgcagaagtctccaagtcca
ctggccttcccacaacctaccggagaggcaatctgtgtggcccactcgcctctgaagaca
gcgagcctgctggcctcacgtgggtgctcccagtcagagcccctttcaggcacctcttca
gactcaaaacccaccactactttcatccttctgacccttgtttctcccacagcaccagtc
actgacaccacgtggccacttgcctctcaggctgccataccccgagactcacctgccatt
taccctgcagcacccactatgcaaagcactttgtttggattgatgagcagcccagccccc
catcttcctgcatctgcactcctgttgcaacttctgtccgccttgatccgggtctctctg
ctcaggtgtttccacaacgcggtcaaggccaagccgccccttctccggaagcccaggctg
cgcgccgggatccgtaggccgactcgcctcagccacctaggcttgcctgggaggggtggc
cgctcgctgccacgagttgtcctttgggcgcagagacctgtcgcttacggcaatcaatcc
cgcctcttgcgcaactcggaaggacacttcaaaggcgatcacaggaacgttcacaatcta
acgctttctggtttcaatctcataccgcaaatatggagaaaggttcagtctcacacggca
aatatggagaaaggatcgcacagagacacctatacacagattcaaatcaaagaggcttta
agaaaaaagaagaggaggaggaagaacaagaagaaagaaagaaagaatcaatgtggatct
acgagtgtcttcaccaatattagcttcactgggttacccctcaaccccttccgaatagag
agacgagaggctttgactgaggcaatggtaaatctaggaaggctgggcttgtgcgggccg
gatattggagctggtcctgaccaccacgcactccacattccatgccgcagcttgctttcc
aggaccgcgacttccagaagagcgctggttagacagttccaaaatgcgggggtacctctt
cggccaaagacaaacgtttacttttcacggtcctcggacacctag
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