Phocoena phocoena (harbor porpoise): 136129810
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Entry
136129810 CDS
T11058
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc05014
Amyotrophic lateral sclerosis
pphc05200
Pathways in cancer
pphc05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136129810 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136129810 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
136129810 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136129810 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136129810 (TPR)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136129810 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
136129810
NCBI-ProteinID:
XP_065742231
LinkDB
All DBs
Position
1:complement(142064128..142128215)
Genome browser
AA seq
2362 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLELEKLNSQLKVLTEKNKELEVAQDRSIAIQSQFTRTKEEL
EAEKRDLIRTNERLSQELEYLTEDVKRLSEKLKESNATKGELQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGRDKGNEILELKCNLENKKEEVSRMEEQM
NGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESALAELEQLRESRRHQ
MQLVDSIVRQRDMYRILLSQTTGVTIPLQASSLDDSSLVSTQKRSSTSQTVATPTPVPVI
ESAEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLHERNQKLTAATQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKE
IATLKQHLSNVEVQLASQSSQRTGKGQPNIKEDMDDLLSQLRQAEEQVNDLKERLKTSTS
NVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRRAIESMEQQLSELKKTLNSVQNEVQEALQRAGTALSNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMVSVRQHLEETTQKAESQLLECKASWEERERMLKD
EVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEGVQGPLNVSLSEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVEGLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHAKRIQQLTEETGRLKA
EIARSNASLTNNQNLIQSLKEDLNKVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENL
QKTLSEKEMEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAA
KSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREH
QERHLEQRDEPQEPTNKVPEQQRQITLKTAPTSGERGIASTSDPPTANIKPTPVVSTPSK
VTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPV
FGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPTNQELSPNIVEV
VQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQISDDTVEMPLPKKLK
SVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDL
GPLQSDQQTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEEEDDDDEDDTGM
GDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGN
TGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRI
QMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQF
NRQRGMSHAMGGRGGINRGNIN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttgcagcaagtcctggagcggacggaactgaacaagctgcccaagtcg
gtccagaacaaacttgagaagttccttgctgaccagcagtccgagatcgatggcctcaag
gggcggcacgagaaatttaaggtggagagcgaacaacagtactttgagatagagaagagg
ctgtcccacagtcaggagagacttgtgaatgaaacccgagagtgccaaagcttgcggctt
gagctggagaagctcaacagtcaactgaaggtgctaactgagaaaaacaaagaacttgaa
gtggctcaggatcgcagtattgccattcagagccagtttacaaggacaaaggaagaatta
gaagctgagaaaagagacttaattagaaccaatgagagactatctcaagaacttgaatat
ttaacagaggatgttaaacgtctaagtgaaaaacttaaagaaagcaatgcaacaaagggt
gagcttcagttaaaattggatgaacttcaagcttctgatgtttctgttaagtatcgagaa
aaacgcttggagcaagaaaaggagttgttacataatcagaatacttggctgaatacagag
ttgaagaccaaaactgatgaacttctggctcttggaagagataaaggaaatgaaattctt
gagcttaaatgtaatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatg
aatggcttgaaaacatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaa
ctgaaagaggccaaggaacagcaggccagtatggaagagaaattccacaatgaattaaat
gctcacataaaactctctaatctttacaagagtgctgctgatgattcagaggcaaagagc
aatgaactgacccgagcagtggatgaattacacaaacttttgaaggaagctggagaagcc
aataaagcaatacaagatcatcttctagaagtagaggaatctaaagatcaaatggaaaaa
gaaatgcttgagaaaatagggaaattagagaaggaattagagaatgcaaatgacctgctt
tctgccacaaaacgtaaaggggccatcttgtctgaagaagagcttgcagccatgtctcct
actgcagcagccgtagctaagatagtgaaacctggcatgaagctaactgagctgtataat
gcttatgtggaaactcaggatcagctgcttttggagaaactagagaacaaaagaattaat
aagtatctagatgaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccaa
cgtgaggagtatgaacgtgcccagaaagctgtggcaagtttatctgttaagcttgaacaa
gctatgaaggagattcagcgattgcaggaggacacagataaagccaataaacattcatct
gtgcttgaaagagacaatcaaagaatggaagtacaaataaaagatctttcacaacagatt
agagtgcttctaatggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaa
gtaagctctgctgatataagtagttcatctgaagtaatatcacagcacctagtatcttac
agaaacattgaagagcttcaacagcaaaatcaacgtctcctggtggcccttcgggaactt
ggggaaaccagagaaagagaagaacaagaaacaacttcatccaaaataactgagcttcag
ctcaaacttgagagcgccctcgctgaactggaacaactccgtgaatcacggcgacatcaa
atgcagcttgttgattccatagttcgtcagcgtgatatgtaccgtattttgttgtcacag
acaacaggagttaccattcctttacaagcttcaagcttagatgatagttctcttgtgtca
actcaaaaacgttcaagtacatcacagactgttgccactcctactccagtacctgtaatt
gagtcagcagaggctatagaagccaaggctgcccttaaacagttgcaggaaatttttgag
aactacaaaaaagaaaaggcagataatgaaaaaatgcagaatgagcagcttgagaaactt
caggagcaagtcacagatttgcgatcacaaaataccaaaatttctacccagctagatttt
gcttctaaacgttatgaaatgctacaagataatgttgaaggatatcgtcgagaaataaca
tccctacacgagagaaatcagaaactcactgcagcaactcaaaagcaggaacagatcatc
aacacaatgacacaagatttgagaggagctaatgaaaagctagctgttgcagaagtaaga
gcagaaaatttgaaaaaggaaaaggaaatgcttaaattgtcagaagttcgtctttctcag
caaagagaatctttgttggctgaacaaagagggcaaaacttgctgctaactaatctgcaa
acaattcagggaatattggaacgatctgaaacagaaaccaaacaaaggcttagtagccag
atagaaaaactggaacatgagatatcccatctaaagaagaagttggaaaatgaggtggaa
caaaggcatacacttactagaaatctagatgttcaacttttagatacaaagagacagctg
gatactgagactaatcttcatcttaacacaaaagaactgttaaaaaatgctcaaaaggaa
attgctacattgaaacagcacctcagtaatgtggaagtccagcttgcttctcagtcctca
cagagaactggtaaaggtcagcctaacatcaaagaagatatggatgaccttctgagtcag
ctaaggcaggcagaagagcaggtgaatgacttgaaggaaagactcaaaacaagcactagt
aatgtggaacagtatcgtgcaatggttactagtttggaagagtccctcaacaaggaaaaa
caggtgacagaagaagtacataagaatattgaagttcgcttaaaagagtcagctgagttt
cagacacagctggaaaagaagttaatggaagtagagaaggaaaaacaggaacttcaggat
gacaagagaagagccatagagagcatggaacaacagttatctgagttaaagaaaacactc
aatagtgttcagaatgaagtacaagaagctcttcagagagctggcacagctttgagtaat
gagcagcaagccagacgggactgtcaggaacaagctaaaatagctgtggaagctcagaat
aagtatgagagagaattgatgctacatgctgctgatgttgaagctctacaagctgccaaa
gaacaggtttccaaaatggtgtcagtgcgtcagcacttggaagaaacaacccagaaagca
gaatcacagttgttggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggat
gaagtttccaagagtgtgtctcgctgtgaagatctagaaaaacaaaacagattacttcat
gatcagattgaaaaattaagtgacaaagtcgtcgcctctatgaaggaaggtgtacaaggt
ccattgaatgtatctctcagtgaagaaggaaaatctcaagaacaaattttagaaattctc
agatttatacgacgagaaaaagaaattgctgaaactaggtttgaagtggctcaggttgag
ggtctgcgctatcgacaaagggttgaacttttagaaagagagctgcaggaactgcaggat
agtctaaatgctgaaagggagaaagttcaggtaactgcaaaaacaatggcccagcatgag
gaactgatgaagaaaaccgaaacaatgaatgtagttatggagaccaataagatgctgagg
gaagaaaaggaaaggctagaacaggatctacaacagatgcaagccaaggtgaggaaactg
gagttagatattttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatg
ttgcaagcagagaagaagttattagaagaggatgtcaaacgttggaaagcacgtaaccag
catctagtgagtcaacagaaagatccagatacagaagaatatcggaagctcctttctgaa
aaggaagttcatgctaagcgtattcaacaattgactgaagaaactggaagacttaaagct
gaaattgcaagatcaaatgcatctttgactaacaaccagaacttaatccagagtctaaag
gaagatttaaataaagtaagaactgaaaaggaaagcatccagaaggacttagatgccaaa
ataattgatattcaagaaaaagttaaaactattactcaagtcaagaaaattgggcgtagg
tacaagactcaatatgaagaacttaaagcacaacaagataaggtcatggagacctcagct
cagtcttctggagaccatcaggaacagcatgtctcagtccaggaaatgcaggagctcaaa
gaaacccttaaccaagctgaaacaaagtcaaaatcactcgagagtcaggtggagaatctg
cagaagacattatctgaaaaagagatggaagcaagaaatctccaggaacagactgtgcag
cttcaatctgagctttcacgacttcgtcaggaccttcaagatagaaccacacaggaggaa
cagctgcgacagcagataactgagaaggaagaaaaaacaagaaaggctattgtagcagca
aaatcaaaaattgcacatttagctggtgtaaaagatcagctaactaaagaaaatgaggag
cttaaacaaaggaatggagccttagatcagcagaaagatgaactggatgttcgtatgact
gctcttaagtcccagtatgaaggtcgaattagtcgcttggaaagagaactcagggagcat
caagagagacaccttgagcagagagatgagcctcaagaacctactaataaggtcccagaa
cagcagagacagatcacgttgaaaacagctccaacttctggtgaaagaggaattgccagc
acatcagaccctccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaa
gtgacagctgcagctatggctgggaataagtcaacacccagggctagtatccgcccgatg
gttacacctgcaactgttacaaatcctactactaccccaacagctacagtgatgcccact
acacaggtggaatcacaagaagccatgcaatcagaagggcctgtggaacatgttccagtt
ttcggaagcacaagtggatctgttcgttctactagtcctaacgtccagccttctatccct
caacccattttaactgttcagcaacaaacacaggctacggcttttgtgcagcccactcaa
cagagtcatcctcagatcgagcctacaaatcaggagctatccccaaacatagtggaggtg
gttcagagttcaccagttgagcggccttctacttccacagcagtgtttggcactgtttca
gctaccccaagttcttctttgccgaagcgcacacgtgaagaggaagaagatagcaccata
gaagcatcagaccagatctctgacgatacagtggaaatgcctcttccaaagaagttgaaa
agtgttacacctgtaggaactgaggaagaagttatggcagaagaaagtactgacggagag
gtagagactcaagtatacaaccaagattctcaagattccattggagaaggagtcacccag
ggagattatacaccaatggaagacagtgaagaaacctctcagtctctacaaatagacctt
ggacctcttcaatcagatcagcaaacaacatcatcacaagatggtcaaggcaaaggagat
gatgtcattgtaattgacagtgatgatgaagaggaggatgatgatgaaaatgatggggaa
catgaggattatgaagaagatgaagaagaagacgatgatgatgaagatgacacagggatg
ggagacgagggtgaagatagtaatgaaggcactggtagtgcagatggcaacgatgggtat
gaagctgatgatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagt
atgggtggaggtgaaagtaatcagagagcagctgattctcaaaacagtggtgaaggaaat
actggtactgcagagtcctctttttcccaggagatttctagagaacaacagccatcatca
gcatctgaaagacagacccctcgagcacctcagtcaccaagacgcccaccacacccactt
cccccaagactgaccattcatgctccacctcaagagttaggaccaccagttcagagaatc
cagatgacccggaggcagtctgtaggacgtgggcttcagttgactccaggaataggtggc
atgcagcagcatttttttgatgatgaagatagaacagttccaagtaccccaactcttgtt
gtgccacatcgtactgatggatttgctgaagcaattcattccccacaagttgctggtgtt
cctagattccgttttggaccacctgaagatatgccacaaacgagttctagtcactctgat
cttggccaacttgcttctcaaggaggtttgggaatgtatgaaacacccctcttcctagct
cacgaagaggagtcgggtggccgaagtgttcccactactcctctgcaagtagcagccccg
gtgactgtatttactgagagtaccacctctgatgcttcagagcatgcttctcagtctgtt
ccaatggtgacaacatccactggcactttatccacaacaaatgaaacagcaacaggtgat
gatggagatgaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctc
gaaattgatagccagcaggaagaagagcctgttcaggcatctgatgagtcagatcttcct
tccaccagccaggaccctccttccagttcttctgtagataccagcagtagtcagccaaag
cctttcagacgagtaagacttcaaacaacattgagacaaggtgtccgtggtcgtcaattt
aacagacagagaggtatgagccatgcaatgggagggagaggaggaataaatagaggaaat
attaattaa
DBGET
integrated database retrieval system
