Phocoena phocoena (harbor porpoise): 136129835
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Entry
136129835 CDS
T11058
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04330
Notch signaling pathway
pphc05017
Spinocerebellar ataxia
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136129835 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
136129835 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
136129835 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
136129835
NCBI-ProteinID:
XP_065742249
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Position
10:92861209..92878360
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AA seq
806 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRPSEDKATAVPSDNHRAEGVAWLPGHASGRGHAGGRL
GPAGPPAELGLQQGIGLHKALSAGLDYSPPSAPRSVPATTTMPAYPPPQSGAPVSPVQYA
HLPHTLQFIGSSQYGGPYAGFIPSQLISPTASPVTSAVASAAGAATPSQRSQLEAYSTLL
ANMGGLSQASGHKAEQQHLGRTAGLLPPGSPPPTQQNQYMHISSSPQSAARPASPPAIPV
HLHPHQAMIPHTLTLGPSPQVVVQYSDSGSHFVAREATKKAESSRLQQGAQAKEILNGEM
EKGRRYGAPTAADLGLVKAGGKAVPHPYESRHVVVHPSPADYGSRDSSGVRASVMVLPNS
STPAADLEVQQVTHREASPSALNDKSSLHLGKPGHRSYALSPQQALGPEGVKAAAVATLS
PHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSSQQQAITYAGGLPPHLVLPGTQP
LLIPVGSADMEGSGAASAIVTSSPQFAAVPHTFVTTALPKSENFSPEALVTQAAYPAMVQ
AQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLK
IDSSTVERIEDSHSPGVAVIQFAVGDHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLF
DLPCSKLSVGDVCISLTLKNLKNGSVKKGQAVDPASVLRKHSKTDGLAGSRHRYAEQENG
INQGSAQMLSENGELKFPEKIGLPAVPLLTKIEPSKPAATRKRRWSAPESRKLEKSEDEP
PLTLPKPSLISQEVKICIEGRSNVGK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcgcagtaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaggacaaggccacggctgtgcccagcgacaaccaccgcgca
gagggcgtggcatggctcccgggccacgcgagcggccggggccacgcgggcgggcggcta
gggccggcgggacccccggcagagctcggtttacagcagggaataggtttacacaaagcg
ctgtccgcggggctggactactccccgcccagcgcgccccggtccgtcccggcgaccacg
acgatgcccgcgtacccgcccccgcagtccggggccccggtgtcgcccgtgcagtacgcc
cacctgccgcataccttacagttcatcggctcttcccagtacggcgggccctacgccggc
ttcatcccttctcagctgatctcccccacggccagccccgtcaccagcgcggtggcctcg
gccgcgggggccgccactccatcccagcgctcccagctggaggcctattctaccctgctg
gccaacatgggcggcctgagccaagcctcgggacacaaggctgagcagcagcacttgggc
aggaccgcggggctcctgccccccgggtccccaccacccacccagcagaaccagtacatg
cacatctccagctctccgcagagcgccgcgcgcccggcctccccgccggccatccccgtc
cacctgcacccgcaccaggcgatgatcccacacacgctcaccctggggccctccccgcag
gtcgtcgtgcagtacagcgactccggcagccactttgtcgcccgcgaggccaccaagaaa
gccgagagcagccggctgcagcagggcgcgcaggccaaggagatcctgaacggggagatg
gagaagggccgcaggtacggggcgcccaccgcggccgacctgggcctggtgaaggcgggc
ggcaaggccgttccccacccgtacgagtccaggcacgtggtggtccaccccagccctgcc
gactacggcagccgcgactcctccggggtgcgggcctctgtgatggtcctgcccaacagt
agcacccctgccgccgacctggaggtgcagcaggtcacccaccgagaggcctccccctcc
gccctcaacgacaaaagcagcctgcacctagggaagcccgggcaccgatcctacgcgctg
tctccccagcaggccctgggccccgaaggcgtgaaggccgctgccgtcgccacgctgtcc
ccccacacggtcattcagaccacacacagtgcttcggagcccctcccggttggactgccg
gccacagccttctacgcagggactcagccgcccgtcatcggctacctgagcagccagcag
caagcgatcacctacgccggcggcctgcccccgcacctggtcctccccggcacccagccc
ctgctcatccctgtgggcagtgctgacatggaggggtcgggtgcggcctcggccatcgtc
acgtcgtcgccccagtttgctgcagtgcctcacacgttcgtcaccaccgcccttcccaag
agcgagaacttcagccccgaggccctggtcacccaggccgcctacccagccatggtgcag
gcgcagatccacctgcccgtggtgcagtcggtggcatcccctgcagccgcgccccctacg
ctgcctccctacttcatgaaaggctccatcatccagctggccaacggggagctgaagaag
gtggaggacttaaaaacggaagacttcatccagagtgcagagatcagcaacgacctgaag
atcgactccagcactgtggagaggatcgaggacagccacagcccgggcgtcgccgtgata
cagtttgctgtcggggatcaccgagcacaggtcagcgtggaagttttggtagagtatcct
ttttttgtgtttggacagggctggtcatcctgttgcccggagagaaccagccagctcttt
gatttgccgtgttctaaactctccgttggggatgtctgtatctcgctcaccctcaagaac
ctgaagaatggctctgttaaaaagggccaggccgtggatcccgccagtgtcctgcggaag
cactcaaagaccgacggcctcgcgggcagtagacacaggtacgccgagcaggaaaacggg
atcaatcagggaagtgcccagatgctctctgagaatggcgaactgaagtttccagaaaaa
attggattgcctgccgtgcccttgctcaccaaaatagaacccagcaagcccgcggccacg
aggaagaggaggtggtcggcgccggagagccgcaaactggagaagtcggaagacgagcca
cctttgactcttcctaagccttctctcatttctcaggaggttaagatttgcattgaaggc
cgctctaacgtaggcaagtag
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