KEGG   Phocoena phocoena (harbor porpoise): 136129842
Entry
136129842         CDS       T11058                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pphc03009]
    136129842 (RRP9)
Ribosome biogenesis [BR:pphc03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    136129842 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_like WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 136129842
NCBI-ProteinID: XP_065742256
LinkDB
Position
10:36756458..36763853
AA seq 475 aa
MSATGAARKRGKPASGAGAGAGAGKLRRKGDSSGDKGKSKGGGKMNEEISSDSETESLVP
RRNEEEEAEELEETAQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGRLKEDVLEQR
GRLQKSVAKEIQAPDPADIRILRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRK
LHVIPRAKKGAEGQPSGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGELGLEQPFWVSSVAALLNTDLVATGSHSNSVRLWQCGEGFRQLDLLCDIPL
VGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLHRAPRPPTAGS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcggcgactggggcggctcgcaagaggggaaagccggcctcgggggccggggctggt
gcgggggccggcaagttgcggcgaaagggcgactcttctggggacaagggcaagtccaag
ggtggcggcaagatgaatgaggagatctccagcgactcggagactgagagcctagttccc
aggaggaatgaggaggaggaggcggaggagctggaggagaccgcacaggagaagaagctg
cgcttggccaagctctaccttgagcagctcaagcagcaagaggaggagaaggctgaggcc
cgtgaatttgaggaggaccaggtggcagggaggctgaaggaggacgtgctcgagcagaga
ggccggctgcagaagtcggtggcaaaggagatccaggccccagaccctgctgacattcga
atcttacggggccaccagctgtccatcacatgtttggttatcacccctgacgacctggcc
atcttttctgccgccaaagactgcaccattattaagtggagtgtggaaagtggacggaag
cttcatgtgatccctcgagccaagaagggtgccgaggggcagccctccggccatagtagc
catgtcctctgcatggccatctcctccgatggcaagtacctggcctcgggtgaccgcagc
aagctcattctcatttgggaggcccagagctgccagcacctgtacaccttcacgggacac
cgggacgccgtgtcggggctggcattccgcagaggcacccaccagctctacagcacgtcc
cacgaccgctctgtgaaggtgtggaatgtggcggagaactcctacgtggagacgctcttc
gggcaccaggatgctgtggctgcactggatgctctgagcagggagtgctgcgtgactgcc
gggggccgggacgggaccgtgcgtgtgtggaagatccccgaggagtcccagcttgtcttc
tacggccaccagggctccattgacagcatccagctcatcaacgaggagcacatggtgtcg
ggtgcagacgatggttctgtagccttgtggggcctctctaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagctgggcttggagcagcccttctgggtgtca
tcggtggcagccctgctcaacacagacctcgtggccacaggctctcacagcaactctgtg
cggctctggcaatgcggggagggcttccggcagcttgaccttctctgcgacatccccctg
gtgggctttatcaatagcctcaagttctccagtgctggggacttcctggtggccggggta
gggcaggagcacaggcttggccggtggtggcggatcaaagaggcccggaactctgtctgc
atcatccctctccacagggcccccaggccccctactgctggctcctga

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