Phocoena phocoena (harbor porpoise): 136130188
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Entry
136130188 CDS
T11058
Symbol
LRRC8B
Name
(RefSeq) volume-regulated anion channel subunit LRRC8B
KO
K22038
volume-regulated anion channel
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136130188 (LRRC8B)
Ion channels [BR:
pphc04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
136130188 (LRRC8B)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
136130188
NCBI-ProteinID:
XP_065742590
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Position
1:79085426..79103412
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AA seq
803 aa
AA seq
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MITLTELKCLADAQSSYHILKPWWDVFWYYITLIMLLVAVLAGALQLTQSRVLCCLPCKV
EFDNHCAVPWDILKASVNTSSDPGTLLPLPLRIQNDLHRQQYSYIDAVCYEKQLHWFAKF
FPYLVLLHTLIFAACSNFWLHYPSTSSRLEHFVAILHKCFDSPWTTRALSETVAEQSVRP
LTLSKSKVLLSSSGCSADVDSNKQSLPYPQPGLESAGIESPTSSVLDKKEGEQAKAIFEK
VKRFRMHVEQKDIIYRVYLKQIIVKVILFVLIITYVPYFLTYITLEIDCSVDVQAFTGYK
RYQCVYSLAEIFKVLASFYVILVILYGLTSSYSLWWMLRSSLKQYSFEALREKSNYSDIP
DVKNDFAFILHLADQYDPLYSKRFSIFLSEVSENKLKQINLNNEWTVEKLKSKLVKNSQD
KIELHLFMLNGLPDNVFELTEIEVLSLELIPEVKLPSAVSQLVNLKELHVYHSSLVVDHP
ALAFLEENLKILRLKFTEMGKIPRWVFHLKNLKELYLSGCVLPEQVSTMHLEGFQDLKNL
RTLYLKSSISRIPQVVTDLLPSLQKLSLDNEGSKLVVLNNLKKMVNLKSLELISCDLERI
PHSIFSLNNLHELNLKENNLKTVEEIISFQHLQNLSCLKLWHNNIAYIPAQIGALSNLEQ
LSLDHNNIENLPLQLFLCTKLHYLDLSYNHLTFIPEEIQYLSNLQYFAVTNNNIEMLPDG
LFQCKKLQCLLLGKNSLMSLSPHVGELSNLTHLELIGNYLETLPPELEGCQSLKRSCLIV
EENLLNTLPPPVTERLQTCLDKC
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgattacactaacagagctaaaatgtttagcagacgcccagtcgtcttatcacatccta
aaaccgtggtgggacgtcttttggtattacatcaccctgatcatgctgctggtggccgtg
ctggctggagccctccagctcacacagagcagggttctgtgctgtcttccgtgtaaggtg
gaattcgacaatcactgcgccgtgccttgggacatcctgaaagccagcgtgaacacgtct
tccgatcccgggactctgcttccgctccccctcagaatccagaacgacctccaccgacag
cagtactcctacatcgacgccgtctgttatgagaagcagctccactggttcgcaaagttc
tttccctacctggtgctcttgcacacgctcatctttgcagcctgcagcaacttttggctg
cactaccccagtaccagttccaggctcgagcattttgtggccatccttcacaagtgcttc
gattctccatggaccacccgtgccctgtcagagacggtggctgagcagtcagtgaggccc
ctgacactctccaagtccaaggttttgctttcttcctcagggtgctcagctgatgttgat
tccaacaagcagtcattgccctacccgcagcctggcttagagtcagctggcatagaaagc
ccaacttctagcgtcctggacaagaaggagggcgaacaggccaaagccatctttgaaaaa
gtgaaaaggttccgcatgcacgtggaacagaaggatatcatttatagagtgtatctgaag
cagataatagtcaaagtcattttgtttgtcctcatcataacttacgttccgtatttttta
acctacattactcttgaaattgactgttcagtggatgtgcaggcttttactggatataag
cgctaccagtgtgtctactccttggcagaaatatttaaggtcctggcttcattttatgtc
atcttggttatactttatggtcttacctcctcctacagcttgtggtggatgctgcggagt
tctctgaagcaatattcttttgaggcgctgagagaaaaaagcaactacagtgacatcccg
gatgtcaagaatgacttcgccttcattctgcatctggctgatcagtatgatcctctttac
tccaaacgcttctccatattcctgtcggaggtcagtgagaacaaactgaaacagatcaac
ctcaacaacgaatggacggtcgagaaactgaaaagtaagcttgtgaaaaattcccaggac
aagatagaactgcatcttttcatgctaaacggtcttccagacaatgtctttgagctgaca
gaaattgaagtgctaagcctggagctgatccctgaggtcaagctgccttctgcggtctcg
cagctggtcaacctcaaggagcttcacgtgtaccattcgtctctggtggtcgaccatcct
gccctggcctttctagaggagaatttaaaaatcctccgcctgaaatttactgaaatgggg
aaaattccacgctgggtatttcatctgaagaatctcaaggagctttacctgtcaggctgt
gttctacctgagcaggtgagtaccatgcatttggagggctttcaggacttgaaaaacctg
aggaccctctacttgaagagcagcatctcccggatcccacaagtcgttacagacctcctg
ccttcgctgcagaagttgtccctcgataacgaggggagcaagctggttgtattgaacaac
ttgaaaaagatggtcaatctgaaaagcctggagctgatcagctgcgacctggaacgcatt
ccgcactccattttcagtctgaacaatttgcatgagttaaaccttaaagaaaataacctt
aaaactgtggaagagatcattagctttcagcatctccagaatctttcctgcttaaagttg
tggcacaataacatagcttatattccggcccagattggggcattatctaatctagagcaa
ctctctttggaccataataacattgagaatctgcccctgcagcttttcctatgcaccaaa
ctacattatttggatctaagctataaccacctgaccttcattccagaagaaatccagtat
ctgagtaatttgcagtactttgctgtgaccaacaacaatattgagatgctaccagatggg
ctgtttcagtgcaaaaagctgcagtgtttacttttggggaaaaatagcctgatgagcttg
tcccctcacgtgggtgagctgtcgaaccttactcatctggagctcattggtaattacctg
gaaacacttcctcctgaactggaaggatgtcagtccctcaaacggagctgtctgattgtt
gaggagaatttgctcaatactcttcctccccctgtaacagaacgtttgcagacatgctta
gataaatgttga
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