Phocoena phocoena (harbor porpoise): 136130375
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Entry
136130375 CDS
T11058
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136130375 (CLSTN3)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Cadherin related
136130375 (CLSTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
136130375
NCBI-ProteinID:
XP_065742695
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Position
11:complement(95694860..95723208)
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AA seq
957 aa
AA seq
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MTLLLLFLLLGSLLPSSSCNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLR
YAGEICGFRLHGSGVPFEAVILDKATGEGLIRAKEPVDCEAQKEHTFTIQAYDCGEGPDG
ANTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQI
CYYEILTPNTPFLIDNDGNIENTEKLQYSGEKLYKFTVTAYDCGKKRAVDDAEVEIQVKP
TCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTNHVAKGCDRDNY
SERALRKLCGAAPGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGTA
GLGSGPQDSLSDHFTLSLWMKHGVTPSKGKKEEETIVCNTVPNEDGFSHYSLTVHGCRIA
FLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYADGISFDPALIHDNGLIH
PPRREPALMIGACWTEEKNKEKEKGGDNSTDATAGDPLPIHHYFHGYLAGFSVRSGRLES
REVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNRALQHVAYMNTL
RFATPGVRPLRLTTAVKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGTAHFALPAVDFE
GPEGVPLFPDLQITCSISHQVEAKKDESWQGTVTDTRMSDEIVHNLDGCEISLVGDDLDP
ERESLLLDVASLQQRGLELTNTSAYLTIAGVEGITVYEEILRLARYRLRRGAALYARKFR
LSCSEMNGRYSSNEFVVEASVLHSVNRVTHPSYMLSSQQFLHRGHQPPPEMAGHSLASSH
RNSMVPSAATLIIVVCVGFLVLMVVLGLVRIHSLHRRISGAGGPPGASSDPKDPDLFWDD
SALTIIVNPMESYQGRQASMAGVAGSHQEDEDSSDSEAADSPSSDERRIIETPPHRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcctgctgttgttcctcttgctcggttccctgctcccctccagctcctgcaac
aaagccaacaagcacaagccatggatcgaggcggaataccagggcatcgtcatggagaac
gacaacactgttctgctgaacccaccactctttgctttggacaaggatgcccccctgcgc
tatgcaggcgagatctgtggcttccggctccatgggtctggggtgccctttgaggctgtg
atcctggacaaggcgacaggagaagggctgatccgggctaaggaacccgtggactgcgag
gcccagaaggaacacaccttcaccatccaggcctatgactgcggcgagggccccgacggg
gccaacaccaagaagtcccacaaggccaccgtgcacgtgcgggtcaatgatgtgaatgag
tttgccccagtgtttgtggagcggctgtaccgcgcggccgtgaccgaggggaagctgtat
gaccgcatcctgcgggtggaggccatcgatggcgactgctccccccagtacagccagatc
tgctactacgagattctcacgcccaacactcccttcctcatcgacaacgacgggaacatt
gagaacacggagaagctgcagtacagtggcgagaagctctacaagtttacggtgacggct
tatgactgcgggaagaagcgggcggtggatgacgctgaggtggagatccaggtgaagccc
acctgcaaacccagctggcaaggctggaacaaaaggattgaatatgcaccaggcgctggg
agcttggctttgttccctggtatccgcctggagacctgtgatgaacccctctggaacatt
caggccaccatagagctgcagaccaaccatgtggccaagggctgtgaccgtgacaactac
tcagagcgggcactgaggaaactctgtggcgcagcccctggggaggtggatctgctgccc
atgcccggccccaatgccaactggacggcgggcctctcggtgcactacagccaggacagc
agcctcatctactggttcaacggcacccaagctgtgcaggtgccactgggtggcaccgct
gggctgggctctgggccccaggacagcctcagtgaccattttaccctgtccttgtggatg
aagcacggtgtaacccccagcaagggcaagaaggaagaggaaaccatcgtgtgtaacacc
gtcccaaacgaggacggcttctctcactactcgctgaccgtccacggctgcagaattgcc
tttctctactggcctctgctggagagtgcccggccagtcaagttcctctggaagctggag
caggtctgcgatgatgagtggcaccactatgctttgaacctcgagttccccacggtcaca
ctctatgccgacggcatctctttcgaccctgccctcatccacgacaatggtctcattcac
ccgccccgaagggagcctgctctcatgattggggcctgctggactgaggagaagaacaaa
gagaaggaaaagggaggcgacaacagtacggacgccacagcaggagaccccttgccgatc
caccactacttccacggctacctggctggtttcagcgtgcgctcaggtcgcctggagagc
cgtgaggtcatcgaatgcctctatgcatgtcgggaggggctggactatagggatttcgag
agcctgggcaaaggcatgaaggtccacgtgaacccctcgcagtccctgctcaccctggag
ggggatgatgtggagaccttcaaccgtgccctacagcatgtggcttacatgaacactctg
cgctttgccacgcccggcgtcaggcccctgcgcctcactactgccgtcaagtgcttcagc
gaagaatcctgtgtctccatccccgacgtggagggctacgtggtggtgctccagcctgat
gcccctcagatcctgctgagtggcactgctcattttgccctcccagctgtggacttcgag
ggacccgagggggtccctttgttccctgatcttcaaatcacttgctccatttctcaccag
gtggaggccaaaaaggacgagagttggcagggcacagtgacagacacacgcatgtcggat
gagatcgtacacaacctggatggctgtgagatttctctggtgggggatgacctggacccc
gagcgggaaagcctgctcttggacgtggcgtccttgcagcagcgaggcttggagctcacc
aacacgtctgcctacctcaccattgccggggtggagggcatcactgtgtatgaagagatc
ctgaggctggctcgttaccggctgcgacgcggggctgccctctatgccaggaagttccgg
ctttcctgctcagaaatgaatgggcgttactccagcaatgaattcgtcgtggaggccagc
gtcctgcacagcgtgaaccgggtcactcaccccagctacatgctcagctcccagcagttc
ctgcaccgaggtcaccagcccccgcctgagatggccggacacagtctggccagctcccac
cggaactccatggtcccgagcgctgcgaccctcatcatcgtggtgtgcgtgggcttcctg
gtgctcatggtcgtcctgggcctcgtgcgcatccactcgctgcaccgccgcatctcgggg
gccggcgggcccccgggggcctccagtgaccccaaggatcccgacctcttctgggatgac
tcagctctcaccattatcgtgaaccccatggagtcctaccagggccggcaggcctccatg
gcgggcgttgcgggcagccatcaggaggacgaggacagcagcgactccgaggcagccgac
tcgcccagcagcgacgagagacgcatcatcgagaccccccctcaccgctactaa
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