Phocoena phocoena (harbor porpoise): 136130415
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Entry
136130415 CDS
T11058
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03020
RNA polymerase
pphc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136130415 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
136130415 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136130415 (POLR3B)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136130415 (POLR3B)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
136130415 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
136130415
NCBI-ProteinID:
XP_065742799
LinkDB
All DBs
Position
11:complement(15977874..16092801)
Genome browser
AA seq
1133 aa
AA seq
DB search
MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIF
KAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGG
PKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVF
LNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
KQKAAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHMINKDTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMV
KTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPL
EGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHY
GTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GQCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgcttgcggaggagtttgggaacttgaccccggagcagctggccgcgccgatc
ccgactgtagaggaaaaatggcggctgcttccagcatttttaaaggtgaaaggccttgtg
aaacagcatatagattcatttaactatttcattaatgtagagataaagaaaataatgaaa
gccaatgaaaaggttacgagtgatgctgaccccatgtggtacttaaagtatcttaatatc
tatgtcgggcttcctgatgttgaagaaagcttcaatgtaactagaccagtgtcccctcat
gagtgccggttgcgggacatgacgtactctgcccccatcacagtggatattgaatacacc
cgaggcagccagaggatcattcgcaacgccttacccattggcagaatgcccataatgcta
cgtagttcaaactgtgttcttacaggaaaaacacccgcagaatttgccaaactgaatgaa
tgtcctttagatccagggggctacttcattgttaaaggagtagaaaaagttattcttatc
caagagcagctgtctaagaacaggatcatcgtggaggctgacagaaaaggggctgtgggt
gcttcagttaccagctctacccatgagaaaaaaagcagaaccaatatggctgtgaaacaa
ggacgattttacttgaggcataatactttgtcagaagatatacccattgtcatcatattt
aaggccatgggtgttgagagtgaccaggaaattgtgcagatgattggaacagaggagcac
gtgatggctgcatttgggcccagtttggaagagtgccagaaagctcagattttcacacag
atgcaggctttaaaatatatagggaacaaagtaagaaggcaaaggatgtggggaggtgga
ccaaagaaaaccaaaatagaagaagcaagagagctcctggcttctaccattctgacccat
gtaccagttaaagaattcaatttccgagccaaatgtatctataccgcagtgatggtgcga
agagtaattctggcccaaggagataataaagttgacgacagagattattatggtaacaag
cgattggagttggcaggacagcttttatctcttctttttgaagatttgttcaaaaaattt
aattctgaaatgaagaagattgcagaccaggtgattcctaagcaaagagcagcccagttt
gatgttgtgaaacacatgcgtcaggaccagattaccaatggcatggtgaatgccatttca
accggaaattggtctctgaagagatttaaaatggatcgccagggtgtgactcaggtgctg
tctcgcttgtcatatatatccgcactgggcatgatgacaagaatctcttcccagtttgaa
aaaacaagaaaagtgagtggccctcgatcgctccagccatctcagtggggaatgctctgc
ccttcggacactcctgaaggagaggcatgtggtttggttaaaaacttggcccttatgacg
cacatcacaactgacatggaagatggacccattgttaaattagccagtaacttgggagta
gaagatgtgaatttattatgtggggaagagctgtcttacccaaatgtgtttcttgtcttt
cttaatggtaacatcctgggtgtcattcgagatcacaagaagctggtgaatacatttcga
ctgatgcgaagagcaggatatatcaatgaatttgtttccatctcaacgaatctgacagat
cggtgtgtctatatttcctctgatggaggaaggctgtgcagaccctatataattgttaag
aaacagaaggctgcagtcacaaataagcatatggaagagctggctcaggggtacaggaat
tttgaagatttcttgcatgagagtctggttgaatatttagatgtgaatgaagaaaatgac
tgtaacattgcactctatgaacatatgattaataaagataccacccacttggagattgaa
cccttcactcttcttggcgtttgtgctggcctgatcccataccctcatcacaaccagtcc
ccaagaaacacatatcagtgtgccatggggaaacaagccatgggtaccattggatacaac
cagcggaacagaattgatactctcatgtatctcctggcatatccacaaaaacccatggtt
aaaacaaagactattgagttgatagaatttgagaaactgcccgctggacagaatgcgaca
gttgctgtgatgagttatagtggctatgatatagaagatgctcttgttttaaacaaggct
tccttggacagaggctttgggcgttgccttgtatataaaaatgctaaatgtactttgaaa
cgatataccaatcagacttttgataaagtgatggggccgatgttggatgctgctacaagg
aaacccatctggcgacatgaaattttagatgcagatggtatttgttctccaggtgagaaa
gtagaaaacaagcaagtgcttgtaaataagtccatgcccacagtgactcagattcccttg
gaaggaagtaatgtgccccagcagccgcagtacaaagatgtgcccatcacctacaaaggg
gcaacggattcatatattgaaaaagtgatgatatcttcgaatgccgaagatgcttttctg
atcaaaatgctgctgagacagacaaggcgtccagaaattggagacaaattcagcagtcgt
catgggcaaaaaggtgtttgtggcttgatcgtccctcaggaagacatgccattttgtgat
tctggcatctgtccggacatcataatgaacccccatggcttcccatctcgaatgacggtg
ggaaagttaatagagctgttggcgggcaaggccggcgtgttagacggcagattccactac
ggcactgcgtttggaggcagtaaagtgaaggatgtgtgtgaggacctcgttcgccacggt
tataactacttggggaaagactatgttacctctggcatcacgggtgaacccttggaagca
tacatctattttggccccgtgtactatcagaaactgaaacacatggtgctcgataagatg
catgcccgggcccggggaccacgagctgtccttaccaggcaacctactgaagggcgatct
cgtgatggtggtttgcgtcttggagaaatggaacgtgactgtttaatcggttatggagca
agtatgcttttactagagagactgatgatttcaagtgatgcctttgaggttgatgtctgt
gggcagtgcggacttcttgggtactccggctggtgccatttctgcaagtcgtcctgccac
gtgtcctccctgcgcatcccgtacgcctgcaagctgctcttccaggagctgcagtcgatg
aacattatccccaggttgaaactgtccaagtacaatgagtaa
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integrated database retrieval system
