Phocoena phocoena (harbor porpoise): 136130526
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Entry
136130526 CDS
T11058
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136130526
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136130526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136130526
03041 Spliceosome [BR:
pphc03041
]
136130526
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136130526
mRNA cycle factors
Common to processing body (P body) and stress granule
136130526
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136130526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
136130526
NCBI-ProteinID:
XP_065743058
LinkDB
All DBs
Position
11:51811659..51813026
Genome browser
AA seq
320 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKGDTEEHH
LRDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRSGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPR
NQGGYGGSSSSSSYGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtcacccaaagagcccgaacagctgcggaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcagtggggaacgctc
acagattgtgtggtaatgagggatccaaacaccaagcgctccagaggcttcgggtttgtc
acatatgccactgtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagggcggtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaaggagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgactgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgaccatgactctgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagcggtcgaggtggctttggtggcagccgcagtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcagttacaacaatcagtcttcaaattttggacccatgaaaggaggaaac
tttggaggcagaagttctggcccctatggtggtggaggccaatactttgccaaaccccga
aaccaaggtggctatggtggttccagcagcagcagtagctatggcagtggcagaaggttt
tga
DBGET
integrated database retrieval system
