KEGG   Phocoena phocoena (harbor porpoise): 136130553
Entry
136130553         CDS       T11058                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03020  RNA polymerase
pphc03420  Nucleotide excision repair
pphc04623  Cytosolic DNA-sensing pathway
pphc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    136130553
  09124 Replication and repair
   03420 Nucleotide excision repair
    136130553
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    136130553
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    136130553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pphc03021]
    136130553
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136130553
Transcription machinery [BR:pphc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     136130553
  RNA polymerase III system
   RNA polymerase III
     136130553
  RNA polymerase I system
   RNA polymerase I
     136130553
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      136130553
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 136130553
NCBI-ProteinID: XP_065743103
LinkDB
Position
11:complement(10250676..10265431)
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLDELENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaggacaactttgatggcgacgactttgatgacgtggaggaggatgaa
gggctagatgagttggagaatgccgaggaggagggtcaggagaatgttgagatccttcct
tctggagagcgaccgcaggccaaccagaagcgaatcaccacaccatatatgaccaagtat
gagcgagcccgtgtgctgggcacccgagcccttcagatcgcgatgtgtgcccccgtgatg
gtggagctggagggggagacagatcccttgctcatcgccatgaaagagctcaaggcccga
aagatccccatcatcattcgccgctacctgcccgacgggagctacgaagactggggggtg
gacgagctcatcatcaccgactga

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