Phocoena phocoena (harbor porpoise): 136131004
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Entry
136131004 CDS
T11058
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136131004 (CAPRIN2)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
136131004 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
136131004
NCBI-ProteinID:
XP_065743758
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All DBs
Position
11:76993715..77033887
Genome browser
AA seq
990 aa
AA seq
DB search
MKSAKPQVNHSQHGESQRAMSPLQPALGSAASPSQAYETYIDNGLICLKHKIRNIEKKKL
KLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQVQYVLQNLMQEHVQKDFKGGLNGAVYLPLKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPK
NAKEKEVSLEEEMLIKSEKKKQLSKTESVKESECLMELAQPEIQPQEFLNRRYMTEVDYS
SKQDEEQSWEADYARKPNLPKCWDVLTEPDGQEKKQESFKSWESSAKHQEVSKPAVSLEQ
RKQEIPKLRSTLQEEQKKQDVSKTKATPSQWKQEALKSKVGYIEEEQKKQETPKPWPIQL
QKEQDPKKQTPKSWTPSVQSEQDITKSWTTPTCEEQDSRPPETPKSWENNVESQKHPLTP
QSQISPKSWGVATASLIPNDQLLPRKFNTEPKDVPKPMHQPVGSSSTLPKDPVLRKEKLQ
DLMTQIQGTCNFMQESILDFDKPPSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQ
AAVPPSKKPSSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPR
KEQEIKESPYSPGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVFPRPSQPFVN
SRGSVRGCTRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYSQR
DNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPV
TNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRF
NCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQG
DQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagccaagccccaagtgaaccacagtcagcatggggaaagccagcgggccatg
agccccttgcagcctgctctcggttctgctgcctctccttcccaagcatatgagacatat
attgataatggactcatatgccttaaacacaaaatcagaaacatcgagaaaaagaagctc
aaactggaagattacaaggatcgcctgaaaaatggagagcaacttaatccagaccagttg
gaagcagttgagaaatatgaagaagtgctacataacttagaatttgccaaggagcttcag
aaaaccttttctggactgagccaagatctgcttaaagcgcagaagaaagcccagagaagg
gagcacatgctaaaacttgaggctgagaagaaaaagcttcgcactatacttcaagttcag
tatgtattacagaacttgatgcaggaacatgtacagaaagacttcaaagggggcttgaat
ggtgcagtgtatttgcctttaaaagaacttgactacctcattaaattttcaaaattgacc
tgtcctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacgacatacaaacacatg
aaagatctactatctaaattgttgaactcaggctattttgaaagtattccagttccaaaa
aatgctaaggaaaaagaggtatcattggaggaagaaatgctaataaaatcagagaagaaa
aaacaattatcgaagactgaatctgtcaaagagtcagagtgtcttatggaacttgcacag
ccagagatacaaccacaagagtttcttaacagacgctacatgacagaagtagattattca
agtaaacaagatgaagagcaatcttgggaagcagattatgctagaaaaccaaatctcccc
aaatgttgggatgtgcttaccgaaccagatggtcaggagaagaaacaggaatccttcaag
tcctgggagtcttccgccaagcaccaggaggtatcaaagcctgcagtttccttagaacag
aggaaacaagagattccaaaactcaggtccactctgcaggaagagcagaagaagcaggat
gtctcgaaaaccaaggcaactcctagccagtggaagcaagaagctcttaaatccaaagtg
ggatacattgaagaggaacagaagaagcaggagacaccaaagccttggccaattcagctg
cagaaagaacaggatccaaagaagcaaactccaaagtcttggacaccttctgtgcagagt
gaacaggacatcaccaagtcatggaccactcccacgtgtgaagaacaggattcaagaccg
ccagagactccaaaatcctgggaaaacaatgttgagagtcaaaaacaccctttaacacca
caatcacagatttctccaaagtcctggggggtagctacagcaagcctcataccaaatgac
cagctgctgcccaggaagtttaatacagaacccaaagatgtgcctaagcctatgcatcag
cctgtaggttcttcctctacccttccaaaggatccagtattgaggaaagaaaaactgcag
gatctgatgacccagattcaaggaacttgtaactttatgcaagaatctattctggatttt
gacaaacctccaagtgcaattccatcatcacagccgccttcagctactccaggtagccca
gtagcatctacagaacaaaatctatccaatcaaagtgattttcttcaagagccattacag
gcagcagttcccccaagcaagaaaccgtcttcactagcttctccaaatcctcccatgtca
aagggctctgaacagggcttccagtcacctccagcaagtagtagttcagtaaccattaac
acagcaccctttcaagccatgcagacagtatttaatgttaatgcacctctgcctccacgt
aaagaacaagaaataaaagaatccccttattcacctggctacaatcaaagttttactaca
gcaagtacacagacaccaccccagtgccaactgccagctatacacgtagaacaaactgtc
ctttctcaagagactgcacagacgaatgtatttcccagaccctctcaaccatttgtcaat
agccggggatctgttagaggatgtactcgtggtgggagattactaaccaattcgtatcgg
tcccctggtggttataaaggttttgatacctatagaggacctccttcaatttccaatgga
aattatagccagctacagttccaagctagagagtatcctggaacaccttattcccaaagg
gataatttccagcagtgctacaagcgaggaggaacatctggtggtcctcgggcaaattcg
agagcagggtggagtgattcttctcaggtgagcagcccagaaagagacaacgaaaccttt
aacagtggtgactctggacaaggagactcccgtagcatgacccctgtggatgtgccagtg
acaaacccagcagccaccatactgccagtacacgtgtatcccctgcctcagcagatgcga
gttgccttctcagcagccagaacctccaatcttgcccctggaactttagaccaacctatt
gtgtttgatcttcttctgaacaacttgggagaaacttttgatcttcagcttggtagattt
aattgcccagtgaatggcacttacgttttcatttttcacatgctaaagctggcagtgaat
gtgccactgtatgtcaacctcatgaagaatgaagaggtcttggtatctgcctatgccaat
gatggtgctccagaccatgaaactgctagcaatcatgcaattcttcagctgttccaggga
gaccagatatggttacgtttgcacagaggagcaatttatggaagtagttggaaatattct
acgttttcaggctatcttctttaccaagattga
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