Phocoena phocoena (harbor porpoise): 136131074
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Entry
136131074 CDS
T11058
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136131074 (HNRNPA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136131074 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136131074 (HNRNPA1)
03041 Spliceosome [BR:
pphc03041
]
136131074 (HNRNPA1)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136131074 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
136131074 (HNRNPA1)
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136131074 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136131074
NCBI-ProteinID:
XP_065743863
LinkDB
All DBs
Position
11:complement(59746989..59751554)
Genome browser
AA seq
370 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSDSYNNGGGGGGFGGGS
GSNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSS
SSSYGSGRRF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtcacccaaagagcccgaacagctgcggaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcagtggggaacgctc
acagattgtgtggtaatgagggatccaaacaccaaacgctccagaggcttcgggtttgtc
acatacgccactgtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagggcggtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgattgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgaccatgactctgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagcggtcgaggtggctttggtggcagccgcggtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtgacagctataacaacggaggaggcggaggcggctttggcggtggtagt
ggaagcaattttggaggtggtggaagctacaatgattttggcagttacaacaatcagtct
tcaaattttggacccatgaaaggaggaaactttggaggcagaagttctggcccctatggt
ggtggaggccaatactttgccaaaccccgaaaccaaggtggctatggtggttccagcagc
agcagtagctatggcagtggcagaaggttttga
DBGET
integrated database retrieval system
