Phocoena phocoena (harbor porpoise): 136131135
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Entry
136131135 CDS
T11058
Symbol
BHLHE41
Name
(RefSeq) class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
136131135 (BHLHE41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136131135 (BHLHE41)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
136131135 (BHLHE41)
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
UPF0261
Motif
Other DBs
NCBI-GeneID:
136131135
NCBI-ProteinID:
XP_065743942
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Position
11:81336356..81339048
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AA seq
482 aa
AA seq
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MDEGIPHLQERQLLEHRDFIGLDYPSLYMCKPKRSMKRDDSKDTYKLPHRLIEKKRRDRI
NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL
KSPIQSDLDAFHSGFQTCAKEVLQYLARFESWTPREPRCVQLINHLHAVATQFLPTPQLL
TQQVPLSKGTGVPSAATPAGSGAAPCLERAGQKLEPLAHCVPVIQRTQPSAELAAENDTD
TDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRRGGGLGGGAAAA
AAALLGPDPAAPAALLRPDAALLSSLVAFGGGGGAPFAQPAAAAAPFCLPFYFLSPSAAA
AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAFPCLSSVLSP
PPEKAAAAAAATLLPHEVAPPGALHPPLPHGRTHLSFAGRSEPGNPESSAQEDPSQPGKE
AP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggaattcctcatttgcaagagagacagttactggaacatagagattttata
ggactggattatccctctttgtatatgtgtaagcccaaaaggagcatgaagcgagacgat
agcaaggatacctacaaattaccgcacagattaatagaaaagaaaagaagagaccgaatt
aatgaatgcatcgctcagctgaaagacttactgcctgaacatctaaagttgacaactctg
gggcacctggagaaagcagtggtcttggaattaactttgaaacacttgaaagctttaaca
gccttaacggagcagcagcatcagaagataattgctttacagaatggggagcgatctctg
aaatcgcccattcagtccgacttggatgcgttccattcgggatttcaaacatgcgccaaa
gaagtcttgcaatacctcgcccggtttgagagctggacgcccagggagccgcggtgtgtc
cagctgatcaaccacttgcacgccgtggccacccagttcttgcccaccccccagctgttg
actcaacaggttcctctgagcaaaggcaccggcgtgccctcggccgccacccccgccggg
tccggggccgccccctgcctggagcgcgccgggcagaagctggagcccctcgcccactgc
gtgccggtcatccagcggactcagcccagcgccgagctcgccgccgagaacgacacggac
accgacagcggctacggcggcgaggccgaggcccggccggaccgcgagaagggcaaaggc
gcgggggcaagccgcgtcaccatcaagcaggagccccccggggaggactcgccggcgccc
aagaggatgaagctggattcccgcaggggcggcggcctggggggcggcgcggcggcggcg
gccgccgcgctcctggggcccgacccggccgccccggccgcgctgctgagacccgacgct
gccctgctcagctcgctggtggcgttcggcggaggcgggggcgcgcccttcgcgcagcct
gcggccgccgcggcccccttctgcctgcccttctacttcctctcgccttcggcggccgcc
gcctacgtgcagcccttcctggacaagagcggcctggagaagtacctgtacccggcggcg
gccgccgccccgttcccactactgtaccccggcatccccgccccggccgccgccgccgcc
gccgccgccgccgctgccgccgccgccgccttcccctgcctgtcctccgtgttgtcgccc
cctcccgagaaggcggcagccgccgctgccgcgaccctcctgccgcacgaggtggcgccc
cctggggcgctgcaccccccgctcccgcacggccgcacccacctgtccttcgccggccgc
agcgagccggggaacccggagagctccgctcaggaagatccctcgcagccaggaaaggaa
gccccctga
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