Phocoena phocoena (harbor porpoise): 136131243
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Entry
136131243 CDS
T11058
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136131243 (PPFIBP1)
Membrane trafficking [BR:
pphc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136131243 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Crescentin
PUMA_CC
WHEP-TRS
DUF4407
Motif
Other DBs
NCBI-GeneID:
136131243
NCBI-ProteinID:
XP_065744104
LinkDB
All DBs
Position
11:complement(79824075..79890989)
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AA seq
1011 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMEADEKEGLRCQIPDSTAETLIEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLMQEINDLRLRVTEMDNERLQNEKKLKSTKSLMAKLSS
MKIKVGQMQYEKQRMEQKWESLKEELASLKEQLEEKESEVKRLQEKLVCKMKGEGIEILD
RDIEVQKMRKAVESLMAANEEKDRKIEDLRQCLNRYKKMQDTVVLAQGQDGDFEDLLPSS
SFSTLLDAQGFSDLEKNLSSTPVMGSPSHDPFNTSAPEEFHTSILQVSIPSLLPASKGLE
TSEKVKLPPKPETSFEENDGKLILGSAVETQLCDSLSTSSLQKSSSLGNLKKESSDGEKE
SIPKTSEAKALVESSPFGSLPHKAPGHNASVDDNPFGTRKTRSSFGRGFFKIKSNKRTAS
APNLAETEKETPEHLDLAGVSSQPKDPQGSSPFQISPPSPDSKKKSRGIMRLFGKLRRSQ
STTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSNSDLDMPFAKWTKEQVCNWLVEQG
LGSYLNSGKRWIASGQTLLQASQQDLEKELGIKHLLHRKKLQLALQALGSEEETNHGKLD
FNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVMSVLHHLSIKRAIQVLR
INNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVL
EPRFNVETMAQLLNIPPSKTLLRRHLATHFNLLIGAEAQHQKRDAMELPDYVLLTATAKV
KPKKLTFSNFGNLRKKKQEDGEEYVCPMELGQASGGTSKKGFKPGLDMHLYDEDDLDRLE
QMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFKDFAARSPSASITDEDSNV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgttggctgcggcgttggagcagatggacggtattata
gcaggttctaaggccctggaatattccaatgggatttttgattgccagtctcccacctcc
ccgttcatgggaagcttgcgagctctgcaccttgtggaagacctgcgcgggttgttagag
atgatggaagcggatgagaaggaaggcttgaggtgccagatcccagactccacggcggaa
acgctcatcgagtggctgcagagtcaaatgacaaatggacacctccctgggaatggagat
gtgtatcaagaaaggctggcacgtttagaaaatgataaagaatctctcgttcttcaggta
agtgtgttaacagaccaggtagaggctcagggagaaaagattcgcgatttggagttttgc
cttgaagagcacagagagaagttgaatgccacggaagaaatgctgcaacaggagcttctg
agcaggacatccttagaaactcagaagttggacctgatggctgaaatatctaacttgaag
ttaaaactgacagctgtagagaaggacagattggattacgaagatagattcagagacaca
gaagggctaatgcaggagatcaatgatttgaggttaagagtcactgaaatggacaatgaa
agacttcagaatgaaaaaaagctgaaatctaccaaatctttaatggccaaactttctagc
atgaaaatcaaggtgggtcagatgcagtatgaaaagcagcggatggaacaaaagtgggag
tccctgaaggaggaactggcatctctaaaagaacagctggaagagaaggaatctgaagta
aaaagactacaagaaaaattggtttgcaagatgaaaggagaagggattgaaattcttgat
cgagatattgaagtacaaaaaatgagaaaggctgtggagtctttgatggcagcaaatgaa
gaaaaggatcggaaaatagaagatcttcgacagtgcctgaacaggtacaagaagatgcaa
gatacagtggtactggcccaaggccaagatggcgactttgaagacctgctcccttccagt
tccttctccactttgctggacgcacagggctttagcgatctggagaaaaacctgtcatct
acgccagtaatgggatctcccagtcatgacccatttaacacaagtgctccagaagagttc
cacaccagcatcttgcaagtttcaatcccttcattattgccagcatctaaaggcttggaa
acttctgaaaaagtgaaattacctcctaagccagagacttcatttgaggagaatgatggg
aaactaatccttggttctgctgttgaaactcaactatgcgatagtctttcaacttcaagt
ctgcaaaagtctagcagcctgggcaatctgaagaaagagtcatcagacggggaaaaggag
tctattccgaagacttcagaggctaaagctctggtagaaagtagcccatttgggagcctc
cctcacaaagctccgggacacaatgcctctgtggatgacaatccctttggcactcgaaaa
accagatcttcctttggtcgtggcttttttaaaatcaaaagtaacaagaggacagcaagt
gcgccaaacttggctgaaacagagaaggagacacctgagcacttagatctggctggtgtg
tcgtctcagccaaaagatccacaggggagcagtcccttccagatatcgccaccgtcgccg
gactccaaaaagaaatctaggggtatcatgagactctttggaaaactcaggagaagtcaa
tcaactacatttaacccagatgacatgtctgagcctgaattcaaaagaggagggacaagg
gcaactgcaggaccccgactgggttggtctcgagatttgggacaatctaacagtgacttg
gatatgccatttgccaagtggaccaaggaacaggtttgcaattggcttgtggaacagggc
ttggggtcctacctgaactctggcaagcgctggattgcatctggccaaacgcttttgcag
gcttctcagcaagatctagagaaggaacttggaatcaagcatttacttcatcgaaagaaa
ctccagctggcactgcaagccctgggatccgaagaagaaaccaatcatggaaagctggat
ttcaactgggtcactagatggttggatgatattggtctcccccaatacaagacccagttt
gatgaaggacgggtagatggtcgaatgcttcattacatgactgttgatgacttactgtct
ttgaaggtcatgagcgtgctccatcatctcagtatcaagagggccatccaggtcctgagg
atcaataactttgaaccaaactgtctgcggaggcgaccctctgacgagaatagcatcacc
ccgtcagaggttcagcagtggaccaatcatcgcgtgatggagtggctgcgctccgtggac
ttggcggaatatgcccccaatctcagaggcagtggtgtccatggtgggctcatggttcta
gaacctcgttttaatgtggaaacaatggctcagttactgaacatcccaccaagcaagacc
ctgctgcgaagacatttggccactcatttcaaccttctgatcggtgctgaggcccaacac
cagaaacgggatgccatggagttacccgattatgtacttttaacagctactgccaaagtg
aagccaaagaaacttaccttcagcaattttgggaatctaagaaagaagaaacaggaagat
ggggaggaatatgtttgtccaatggaattgggacaggcctcaggaggtacatctaagaaa
ggatttaagcctggtttggacatgcacctgtatgatgaggacgacttggaccggttagag
cagatggaagactcagaagggacagtgagacagataggcgccttctccgagggcatcaac
aatctaacccacatgttaaaggaagacgagatgtttaaagattttgctgcccgttccccc
agcgccagcatcaccgatgaagactcaaatgtctga
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