Phocoena phocoena (harbor porpoise): 136131438
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Entry
136131438 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar and coiled-body phosphoprotein 1-like
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136131438
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
136131438
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRP40_C
Motif
Other DBs
NCBI-GeneID:
136131438
NCBI-ProteinID:
XP_065744273
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Position
11:84981934..84984145
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AA seq
713 aa
AA seq
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MADAGLRRVVPSNLYPLVLGFLCDNQLSDVANKFAKATGATQQDASASSLLDIYSFWLKS
TKAPKRKLQANGPVTKKAKKKTSSSDSSEDSSEEEKAQGPPAKKAAVPAKQASLLQHPGK
AAVKASESSSSSEESSDDEEDKKKKPVQKGVKPQAKTVKAPPKKAKSSDSDSDLSSEDEV
PKNQKPKTTPVAAKAQAKALARPGTPARPAPKVVNGKAAGSNSSSSSDDDSXEGKAAAVS
KKTVPKTQAVAKAPVKAAATPAQKSSSSEDSSSEEEEEEEQKKKPMKKKPGPYSSVPPPS
VPAPKKSLEIQAPKKAAEKQQPVESSEDSSDEPDSGSEEEKRPPAKAGISKATTKPAPAK
KAAESSSDSSDSDSSEDEAPAKPASTTKNSSGKPAAAPKQSAVKPATTPKQPAATGXRKA
DSTSSEEESSSSEEKKTKKTVATPKSKEMAKAAPSLPAKQASQGGGDSSSDSDSSSSEED
EEEKMPKPPAKKKPQKAGGTVAPSKPASVKKAKAESSSTSSSEDSSEQEEEEKPKAKGTP
RPQTAKANGTCALTAQNGKADKDSNEEEGGKKKAAVAVAKPGSGKKWKQSEAAEEAETPP
AKKIKLQTPSTFPKRKKGERRGSSPFRRIREEEIEVDARVADNSFDAKRGATRDWGEQAN
QVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFDSERPWTICSTAGVMV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccggcttgcgccgcgtggttcccagcaacctgtatcccctcgtgcttggc
tttctgtgcgataaccagctctcggacgtggccaacaagttcgccaaggcaacaggcgcg
acccagcaggatgccagcgcctcttccctcttggacatctatagtttctggctcaagtcc
accaaggccccaaagcggaagttacaggcaaatggaccagtgactaagaaggctaagaag
aagacttcatccagtgacagcagtgaggacagcagtgaggaggaaaaagcccaagggcct
cccgctaagaaagctgctgtacctgccaagcaggccagtctgcttcagcatcctggaaag
gctgcagtcaaggcatcagagagcagcagcagcagtgaagaatccagtgatgatgaggag
gacaaaaagaaaaagcctgtccagaagggagttaagccccaagccaagacagtcaaagct
cctcctaagaaggccaagagctctgattctgactctgacttaagctcagaggatgaggtg
ccaaagaaccagaagccaaagacaacacccgtggcagctaaagctcaggcgaaagcccta
gccagaccaggtacaccagctcgtcccgcacctaaagtagtcaatggcaaagcagctggt
agtaacagcagcagcagcagtgatgatgactcannggaggggaaggcagcagccgtatct
aagaagactgtacctaaaacgcaagctgtggccaaggccccagtgaaagcagctgccact
cctgcccaaaagagttccagcagtgaggactcctccagtgaggaggaggaggaggaagag
cagaagaaaaagcccatgaagaaaaaaccaggtccctatagttcagttcccccgccctct
gttcccgcacccaagaagtccctggaaattcaggctcccaagaaagctgcagagaagcag
cagcctgtggagagcagtgaggacagcagcgacgagcctgattcaggttctgaggaagaa
aagagacccccagctaaggcaggcatctccaaagcaactactaaaccagctccagcaaag
aaggcagcagagagctcttcagacagctcagactctgacagttctgaggatgaagctcct
gctaagccagccagtaccaccaagaattcctcaggtaagccagctgccgctcccaagcag
tctgcggttaagccagctacaactcccaagcagcctgcagccactggcnncagaaaggct
gatagcacctccagcgaggaggagagcagttctagtgaggagaagaagacgaagaagact
gtagccacccctaagtccaaggagatggccaaagcagctccgtctttgcctgccaagcag
gcctctcagggtggtggggacagcagctctgattcagacagctccagcagcgaggaagac
gaggaagagaagatgcctaaacccccagccaaaaagaagccacagaaggcagggggaact
gtagccccttccaaaccagcctctgtgaagaaagcaaaggccgagagcagcagcacttct
tcctctgaggactccagtgagcaggaggaagaggagaagcccaaggctaagggcactcca
agaccacaaactgccaaggccaatggcacctgtgcgctgactgcccagaatggaaaagca
gacaaggacagcaacgaggaggaggggggcaagaaaaaggcagcagtggcagttgctaag
ccaggttcaggaaagaagtggaagcagagtgaggctgctgaggaggcagagactcctcca
gccaagaagataaagctccagacccccagcacgtttcctaaaaggaagaaaggagaacga
aggggatcctccccattccgaaggatcagggaggaggagattgaggtggatgctcgagtg
gcagacaattcctttgacgccaagcggggtgcaaccagagactggggggagcaagccaat
caagttctcaagttcaccaaaggcaaatccttccggcacgagaaaaccaagaagaagcgg
ggcagttaccggggaggctccatctctgtccaagtcaattctgttaagtttgacagcgag
cgaccgtggaccatctgtagcacagcaggggtgatggtctga
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