Phocoena phocoena (harbor porpoise): 136131773
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Entry
136131773 CDS
T11058
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
pphc05016
Huntington disease
pphc05017
Spinocerebellar ataxia
pphc05165
Human papillomavirus infection
pphc05166
Human T-cell leukemia virus 1 infection
pphc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136131773 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
136131773 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
136131773 (TBP)
05165 Human papillomavirus infection
136131773 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
136131773 (TBP)
05017 Spinocerebellar ataxia
136131773 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136131773 (TBP)
03021 Transcription machinery [BR:
pphc03021
]
136131773 (TBP)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
136131773 (TBP)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136131773 (TBP)
RNA polymerase III system
TFIIIB
136131773 (TBP)
RNA polymerase I system
SL1/TIF-1B
136131773 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Androgen_recep
ANAPC_CDC26
Presenilin
Motif
Other DBs
NCBI-GeneID:
136131773
NCBI-ProteinID:
XP_065744572
LinkDB
All DBs
Position
12:complement(82189..93685)
Genome browser
AA seq
315 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQSTSSLSILEEQQRQQQ
QQQQQQQQQQQQAAVAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMT
PMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRI
REPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDV
KFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEA
FENIYPILKGFRKTT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctcccaccttatgcccagggcctggcctcccctcagggggcc
atgactcctggaatccctatctttagtccgatgatgccgtatggcacaggactgactcca
cagcctattcagagcaccagcagtctgtctattttggaagaacagcaaaggcagcagcag
caacagcagcagcagcagcagcagcagcagcagcaggcggcagtggcagccgttcagcag
tcgacctcccagcaggcgacccagggggcctccggccagacaccacagcttttccactca
cagactcttacgaccgcacccttgccgggcaccactcccctgtatccctcccccatgact
cccatgacccccatcacccctgccacgccagcctcggagagctctgggattgtgccgcag
ctgcaaaatattgtatccacagtgaatcttggttgtaaacttgacctgaagaccattgca
cttcgtgcccggaatgctgaatataatcccaagcggtttgctgctgtaatcatgaggata
agagagccccggaccactgcactgatattcagttctgggaagatggtgtgcacaggagcc
aagagtgaagaacagtccagactagcagcaagaaaatatgccagggttgtacagaagttg
ggttttccagctaagttcttggacttcaagattcagaatatggtggggagctgcgatgtg
aagttccctataaggttagaaggccttgtgcttacccaccaacagttcagtagttatgag
ccagagttatttcctggtttaatctacagaatgatcaaaccgagaattgttctccttatt
tttgtttctggaaaagttgtattaacaggtgctaaagtcagagcagaaatttatgaagcc
tttgagaacatctaccctattctaaagggtttcaggaagacaacgtaa
DBGET
integrated database retrieval system