KEGG   Phocoena phocoena (harbor porpoise): 136132025
Entry
136132025         CDS       T11058                                 
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03022  Basal transcription factors
pphc05016  Huntington disease
pphc05017  Spinocerebellar ataxia
pphc05165  Human papillomavirus infection
pphc05166  Human T-cell leukemia virus 1 infection
pphc05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    136132025 (TBPL1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    136132025 (TBPL1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    136132025 (TBPL1)
   05165 Human papillomavirus infection
    136132025 (TBPL1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    136132025 (TBPL1)
   05017 Spinocerebellar ataxia
    136132025 (TBPL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pphc03000]
    136132025 (TBPL1)
   03021 Transcription machinery [BR:pphc03021]
    136132025 (TBPL1)
Transcription factors [BR:pphc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    136132025 (TBPL1)
Transcription machinery [BR:pphc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     136132025 (TBPL1)
  RNA polymerase III system
    TFIIIB
     136132025 (TBPL1)
  RNA polymerase I system
    SL1/TIF-1B
     136132025 (TBPL1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 136132025
NCBI-ProteinID: XP_065744892
LinkDB
Position
12:complement(28993201..29022876)
AA seq 186 aa
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQVYPFVFE
SRKEIL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggatgcagacagtgatgttgcactggacattctaattacaaatgtagtctgtgttttt
agaacaagatgccatttgaacttaagaaagattgctttggagggagcaaatgtaatttat
aagcgtgacgttggaaaagtattaatgaagcttagaaagcctagaattacagctacgatt
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaagaagctaaatttggt
gccagacgtttagcccggagtctccagaaactaggatttcaggtaatatttacagatttt
aaggttgttaacgttttggcagtatgtaacatgccatttgaaatacgtttgccagaattc
acaaagaacaatagacctcatgccagttacgaacctgaacttcatcctgctgtgtgttat
cggataaaatctctaagagctacattacagattttttcaacaggaagtatcacagtaaca
gggcccaatgtaaaggccgtcgctactgctgtggaacaggtatacccgtttgtgtttgaa
agcaggaaagaaattttgtaa

DBGET integrated database retrieval system