Phocoena phocoena (harbor porpoise): 136132176
Help
Entry
136132176 CDS
T11058
Symbol
CASP8AP2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136132176 (CASP8AP2)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
136132176 (CASP8AP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
ADIP
Motif
Other DBs
NCBI-GeneID:
136132176
NCBI-ProteinID:
XP_065745133
LinkDB
All DBs
Position
12:66573110..66594337
Genome browser
AA seq
1973 aa
AA seq
DB search
MAADDDNGDGTSLFDVFSASPLKNNDEGSLDIYAGLDSAVSDNATKSSVPSRNCLDLYEE
ILTEEGTAKEATYNDLQVEYGKCQLQMKELMKKFKEIQTQNFSLKNENQSLKKNISALIK
TARVEINRKDEEINNLHQRLSEFPHLRNTHKTSRTPDIVKTKGLKSRSLHLDDCSKTDHR
VKSDVSKDVHYSTSLPYLEKEGKSHSEKKGTSHLPTSVEKHSTNGIWSRSHYQVGEGSSS
EDHRRGRKDRHSQYGRGTDRIRKDLNTSCGDGEPRNIEASQRLQGRPEKYSKGEPKAESK
NSKFKSNTDLDYKNERSSSSWEKESSRDRSHTRLESQSDKKLERQSERSQNINRKELKSQ
DKEERKVDQKPKSVVKDQDHWKRSERALLPYSKKELAKSSHNSSKYHPEERRGREDCKRD
RAVSNHSFQEGRCPSSLSTNRIHKHVDSKEVDAVHQWENAPLRVERHRTEDKRKREQEGK
EENKHMRNEKRVLAEHLQKTNRETKKAATDLKRQNEPKNDNGEVSNNDVSEGVDDKEPAV
KPENGSNETQNKDLKLSFMEKLNLTLSPAKKQPVSQENLHKISDTPKSSDICDLESLVQA
KTVTCIPSVSEHITEETKSELLEPKDALTAASEPRTSVSERKIEEENSLFIKSVANTVHC
DMSICGTEISFSASVEMQQTESLFPSSTEMEQTINGARAAVPVVIDTVQTNVSQNFGLEL
DTKRKDDLNSCSISEDTEMKEAFSTKVTESNESILQPSIEEAVILPTVLSEDGKPNLEPS
LVDAPLVGSKSCHLEPCLPKETPESSLRQTELTDHRMEIGEANSVYHDDENSVLSIDLNQ
LRPIPEAISPLNSPVRPVAKVLRLESPSRVPLYNNSHKDVFPPNLAHSASKSQSDLNKEN
QKPICKSDKFTEADSHKNSSLDELEEGEIISDSEKSEPQKRFDKSTNPRASAEVQNTRTN
PGSRKSTVHLDKDNRKISSIKIHQTKSKWNKRRTESSRSSKTERKDRSVGTSSLEKIVPI
IAAPSSVREVVHMLRMIRKHVRKNYMKFKVKFSSIQFHRIIESAILSFTSLIKHLDLSKI
SKSVTILQKNLCDVIESKLKQVKKNGIVDRLFEQQLPDMKKKLWKFVDEQLDYLFTKLKK
ILAKFCDSINIGSDSDEGKLEKRNKDKAQYSNCQKGNVGSSSKEMLKEKPPKSEDSGYSK
SLVGCKKSEEKHQEQNNSSINRVKHNIKKSTNTCFGNIKNPQFEEASLEPNCPSTPKAGK
MEGSTIEDSQASQHAALKPERSFEILTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLDN
SVNCNEKSEWELKTPAKQMLETLKCESLPVCTTEELVSGVVSPCPKVISDDNWSLLSSEK
GPSLSSGLSLPVHPDVLDESCMFEVSTNVALSKDNVCSSEKSKPCVSSILLEDLAVSLTV
PSPLKSDGHLSFLKSDVSSNSTPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKS
SCSSSWTSRSIAPGFQYHPNLPMHAVIMEKSNDHFIVKIRRAAPSTSPSHKQNTVADESL
PRVEKEADETVEKKYISCQYRVFKSVEELKISSKNVDSSKSVHEEQDCMIQTEVPDIYEF
LKDASGKVVHSTEVVEECFKLHQVWEPKVPESVEELPPMDEIPHSVEDHLPNAYIDLTKD
PVTETKKLGEFVEVTVLNIEQLGCSGSSVDQNAPVLDSMQPDTVDAFIDLTQDVSSDSKN
EGNCPALAVEDLGCQVICVDEDNSKEEKVQVANRPLECIVEEACIDLTSAFPSSGEVKKV
DVKSELASNSGSSELPGALDNAHKKRKNLSDLNPSQKKQRKEADLTGREKTKKITQDSGE
NGDAHRKKASKKKAPVVTKDPSSLKESPGTKDASAASATSLASLSAKNVIKKKGEIIVSW
TRNDDREILLECQKKGPSLKTFSQLAAKLNKNPYQVSERFQQLMKLFEKSKCR
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatgatgacaatggtgatggaacaagtttatttgatgtcttttctgcttct
cctcttaaaaataatgatgaaggttctttggacatatatgctgggttggacagtgctgtt
tctgacaatgctaccaaatcctctgtaccatccagaaattgtttggatttatatgaagaa
atcctgactgaagaaggaactgcaaaggaggcaacatataatgatttgcaggtagaatat
ggaaaatgtcagctgcaaatgaaagagctgatgaaaaagtttaaggaaatacagacacag
aatttcagcttaaaaaatgaaaaccagtctcttaagaaaaatatctcagcacttatcaaa
actgccagagtggaaataaaccgcaaagatgaagaaataaataatcttcaccaaagattg
tctgagtttccacatcttcgaaatactcataaaacttcaaggacaccagatatagttaaa
acaaaaggtcttaaatccagatctctccatttggatgattgttcaaagactgatcacaga
gtgaaaagtgatgtttctaaagatgtacattatagcacttcactgccatacctcgaaaag
gaaggaaaatcacattctgaaaaaaagggcacttcacatttgcctacatctgttgaaaaa
cactccaccaatggcatttggtcacgttcccattatcaggttggtgagggtagttccagt
gaggatcacagaagaggaaggaaagatagacatagccagtacggcagagggactgacaga
atacgaaaagacttgaacactagctgtggtgatggtgaaccgaggaacatagaggccagt
cagaggctacaaggacgtcctgagaaatacagtaaaggtgaaccaaaggctgaaagcaaa
aattcaaagtttaaaagtaacacagatttggattataaaaatgaacgcagtagctcttct
tgggagaaagaaagctctagagacaggtcacacactcgactagaatctcaaagtgacaaa
aaactcgaaagacaaagtgaaagatcacaaaatataaatagaaaagaacttaaatcacaa
gacaaagaagaaaggaaagttgaccaaaaacctaagtcagtagtaaaagaccaggatcat
tggaaaagatctgaacgagcattgcttccttattccaagaaggaactagcaaaatcttct
cataattcaagtaaatatcatccagaagagagaagaggccgggaagattgtaaaagagac
agggctgtaagtaatcatagttttcaagaaggaagatgtccgtcctctctttcaaccaat
agaattcacaaacatgttgactctaaggaagttgatgctgtgcaccaatgggaaaatgca
cctttaagggtagaaaggcatagaactgaagataagcggaaaagagaacaagagggcaaa
gaagaaaataagcatatgagaaatgaaaaaagagtacttgcagaacatctgcagaagaca
aacagagagactaagaaagccgctacagatttaaagagacagaatgagccaaaaaatgat
aacggtgaagtctctaataatgatgtttctgaaggagtggatgataaagagccagcagtt
aaacctgagaacggttcaaatgaaacacaaaacaaagacttaaagttaagctttatggaa
aaattgaacttaactctttctcctgctaaaaagcagcctgtttctcaggaaaatctgcat
aaaatatccgatactcccaaatcaagtgacatatgtgatttggagtccttggtgcaggct
aaaactgtgacatgtattccctctgtcagtgaacatatcacagaggaaaccaaatcagag
ttattggaaccaaaggatgctcttacagcagcatctgaacccaggaccagtgtttcagaa
aggaaaatagaagaagaaaatagtttgttcattaaatctgttgcgaatactgtgcattgt
gatatgtccatttgtggcacagagatttccttctcagcatctgtggaaatgcaacaaaca
gaatccttgtttccatcatcaacagaaatggaacagaccattaatggtgccagggcagca
gttcctgtggtaatagacacagtacaaacaaatgtttctcaaaactttggtttggaattg
gataccaaaagaaaggatgacttaaattcttgtagtatttccgaagatacagaaatgaag
gaggctttttcaaccaaagtgaccgaatccaatgaaagcattttgcagccttcaattgaa
gaagctgtcattttgccaacagtcctttcagaagatggtaaaccaaaccttgagccttct
cttgtagatgcaccactggttgggagtaagtcttgtcacttggagccttgcttacctaaa
gagactccagaatcttcacttcggcagactgagttaacggaccacagaatggaaattggt
gaagcaaactcagtatatcacgacgatgagaactcagttctgagcattgaccttaatcag
ctgagacctattccagaagccatcagtcctctgaatagtcccgtgagacctgtagcaaaa
gttcttagactggaaagcccatctcgagttccattatataataacagtcataaagatgtg
tttccaccaaatttagctcattctgcctccaagagtcagtctgatctcaataaggaaaat
caaaagccaatttgcaaatctgacaaatttacagaagcagactcccacaagaattcatct
ttagatgaattagaagaaggagaaattataagcgacagtgaaaaatctgaaccacaaaaa
cgttttgacaaaagtaccaacccaagagcttctgctgaagtgcagaacacaagaactaac
ccaggaagtaggaaaagcactgtgcatttggataaagacaacaggaagatatcttctata
aaaatccatcagaccaaaagcaaatggaataaaagacgaactgaatctagcagatcttca
aaaacagagaggaaagataggtcagtgggcacttccagcctggaaaaaatagtgccaatt
attgctgcaccctcttctgtccgagaggttgtgcacatgttacgaatgataagaaaacat
gtaaggaaaaattatatgaaattcaaggtaaaattttcatcaatacaatttcatagaatt
attgagtcagcaattttgagttttacatcactaattaaacaccttgacttatccaaaatc
tctaagtcagtgactattttacagaagaatctctgtgatgttatagaatccaaacttaag
caagttaaaaagaatggcatcgtggatcgtttatttgaacagcagctaccagatatgaaa
aaaaaattgtggaaatttgtagatgaacaacttgattacttgtttacaaagcttaagaaa
atcttagcaaagttttgtgactccataaacattggcagtgacagtgacgaaggaaaactt
gaaaagagaaataaagacaaagcacaatattcaaattgtcagaaggggaatgtaggcagc
tccagcaaagaaatgttgaaggagaaaccccccaaatcagaagattctggttactctaag
tctttagtaggttgtaaaaaatcggaggaaaaacatcaagagcaaaataattccagtatt
aacagagtaaagcacaacattaaaaaaagtactaacacttgctttggtaatattaagaac
cctcaatttgaagaggcgtccttggaaccaaactgcccgagcaccccaaaggcaggaaaa
atggaaggcagcaccatagaggactcacaggcatcccagcacgctgctttgaagccagaa
cgcagttttgagattcttactgagcagcaagcatctagccttacttttaatttagtgagt
gatgcacagatgggagaaatatttaaaagtttgttgcaaggttctgatcttttggacaac
agtgttaactgtaacgaaaaaagtgagtgggagttaaagacaccagcgaaacagatgcta
gagactcttaaatgtgaatctctaccagtttgtacaacggaagagctcgtttcaggggtg
gtttctccctgtcctaaggtgattagtgatgataattggtcattattgtcatctgagaaa
ggtccgtctctgtcttcagggctttcattgccagttcatcctgatgtgttggatgaaagt
tgtatgtttgaagtgtccactaacgtagctttaagtaaagataatgtatgtagttcagaa
aagagtaagccctgtgtttcctccatactccttgaagatctagcagtctctttaacagta
ccatcacctctaaagtcagatggtcatctcagtttcttaaagtcagatgtttcgtctaat
tcaacgcccgaagaagttattagtgcccattttagtgaagatgccttacttgaggaagag
gatgcatctgaacaggacattcatttagccctggagtctgataattcaagcagtaaatca
agttgttcttcatcatggacaagccggtctattgctccaggctttcagtaccaccctaat
ctacccatgcacgctgtcataatggaaaagtccaatgatcatttcattgtgaaaatacgc
cgtgcggcaccatctacctcccctagtcataaacagaatacggtggctgatgaatctttg
ccaagagtggaaaaggaagctgacgaaacagtggagaaaaaatatatttcatgtcagtac
agagtttttaaatctgtggaggaattgaaaatttccagtaaaaatgttgatagcagtaaa
tcagttcatgaagaacaggactgtatgatacaaacagaggttcccgatatatatgaattt
cttaaagatgcttcaggtaaagtggttcatagtactgaagtagttgaagaatgtttcaag
ttgcatcaagtatgggaaccaaaagtacctgaaagcgttgaagaattgcctccaatggac
gaaattccacattctgtcgaggatcatcttccaaacgcgtatatagacctcacaaaagat
ccagtcaccgagaccaaaaagttgggggaattcgtagaagtaacagttttaaatattgag
cagttgggatgttctggaagcagtgtggatcaaaatgctccagtattggacagtatgcag
cctgatactgtagatgcttttattgatttgacacaagatgtttcaagtgacagtaaaaat
gaaggtaactgtcctgctttagctgttgaagacttggggtgtcaggtgatatgtgtagat
gaagataactcaaaggaagaaaaggtgcaagtggcaaacaggcctttggaatgcattgtt
gaggaagcctgtatcgatttaacctcggcatttcccagttcgggtgaagtgaaaaaggtt
gatgtaaaatcagagttggcatcaaattctggtagttcagagttgcctggggctttggat
aatgctcacaaaaagaggaaaaatctttctgatctaaatccttctcagaaaaaacagaga
aaggaagcagacttaaccggcagggaaaagaccaagaaaattacccaagattctggtgag
aatggtgatgctcaccgaaagaaagccagtaagaaaaaggcccctgtagtaactaaagat
ccctcgtcgttaaaggaaagcccagggactaaggatgcatcagcagcatctgccacttct
cttgcaagcctttctgcgaagaatgttattaaaaagaagggagaaattatagtttcgtgg
acaagaaatgatgaccgggaaattttattggagtgtcagaaaaaagggccatcgttgaaa
acgttttctcagttagctgccaagttgaataaaaatccatatcaggtctcagaaagattc
cagcagctaatgaagctctttgaaaagtcaaaatgcaggtag
DBGET
integrated database retrieval system
