Phocoena phocoena (harbor porpoise): 136132354
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Entry
136132354 CDS
T11058
Symbol
STXBP5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136132354 (STXBP5)
Membrane trafficking [BR:
pphc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136132354 (STXBP5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
136132354 (STXBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
MIOS_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
136132354
NCBI-ProteinID:
XP_065745320
LinkDB
All DBs
Position
12:complement(17836669..18001821)
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AA seq
1153 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSSSASQQQQLQQQHPPGNREPEIQETLQSEHFQLCKTVRHGFPY
QPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALA
DDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNVESFTLSG
YVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDE
AIHSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPILKV
EFKTTRPGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPND
FQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYS
VGARQKRQGYSKKEWPINGGNWGLGAQSYSEIIITGHADGSVKFWDASAINLQVLYKLKT
SKVFEKSRNKDDKPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVITE
VIPMLEVRLLYEISDVESPEGEQAPPLPTPVGSANPQPVPPQSHPSTSSSSSDGLRDNVP
CLKVKNSPLKQSPGYQTELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNCSGIAMVDYL
QKAVLLNLGTIELCGSSDPYRREPRSPRKSRQPSGAGLCDISEGTVAPEDRCKSPTSGSS
SPHNSDDQQKVNNFIEKVKIKSRKFSKTVASDIAKMSRKLSLPTDLKPDLDIKDNSFSRS
RSSSVTSIDKESREAISALHFCETFTRKADSAPSPCLWVGTTLGTVLVIALNLPPGGEQR
LLQPVIVSPSGTILRLKGAVLRMAFLDSTGCLMPPAYESWKEHNVPEEKDEKEKLKKRRP
VSVSPSSSQEISENQYAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVSLSNSIC
LACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTY
SQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLA
QHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLSDLEERTAAMLSSADSFSKHAHE
MMLKYKDKKWYQF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattcaacatcaggaaggtgctggacggcctgaccgccggctcgtcttcggcc
tcgcagcagcagcaactgcagcagcagcacccgcctgggaaccgggagcccgagatccag
gaaacgctccagtccgagcactttcagctgtgcaagactgttcgccatggatttccctat
caaccctcagccctggcctttgatcctgtacagaagatcctggcagtgggaactcagact
ggtgctttaaggctctttggtcgtccaggagtagaatgttattgccagcatgacagtgga
gctgcagtaatccagctccagttcctgattaatgagggagctcttgtgagtgccttggct
gatgacacgttacatttatggaatttacgtcaaaagagacctgccatactacattcactt
aaattttgcagagaaagggttacgttttgccatctgcctttccagagtaagtggctctat
gtgggcactgaacgaggtaatatacatattgtcaatgtggagtccttcacactctcaggc
tacgtcattatgtggaataaagccattgaactgtcatctaaatctcacccaggacctgtc
gtccatataagtgataatccaatggatgaaggaaagcttttgattggctttgaatctgga
acagtagtgttatgggacctcaaatcaaagaaagcagactacagatacacctacgatgag
gctatccactctgttgcttggcatcatgaaggaaaacaatttatttgcagtcattcagat
ggcactttgactatatggaatgtgagatcccctgctaagcctgtacagacgataactcca
catggaaaacagttaaaggatgggaagaagccagaaccatgcaagcctatcctcaaggtg
gaattcaaaacgactagacctggggaaccttttattattttatcaggaggtttgtcatac
gatactgtaggaagaagaccttgcttaacagttatgcatgggaaaagtactgcagtgcta
gaaatggactattcaattgttgatttcctgacgctgtgtgaaaccccatacccaaatgat
tttcaagaaccatatgctgtggttgttctactagaaaaggatttagtacttatagacctt
gcacaaaatgggtatcctatatttgaaaatccctaccctttgagtatacatgaatcccct
gttacatgttgcgaatattttgctgattgtcctgtggaccttattcctgcactttattct
gttggagctagacagaaacgtcaaggttacagcaaaaaggaatggcccattaatggaggc
aattggggcttgggtgctcaaagctactcagaaataattattacagggcacgctgacggg
tcagttaagttctgggatgcttctgcgataaatctacaagtattatataaattaaagacg
tctaaagtatttgaaaagtcaagaaataaagatgacaagccaaacacagacattgtagat
gaagatccttatgccatccagatcatctcctggtgtccagaaagtcgaatgttgtgcata
gcaggagtttcagctcatgtcattatttatagattcagcaaacaagaagtgattacagaa
gtcattccgatgcttgaagttcgattgttatatgagataagtgatgtggaatctccagag
ggtgaacaggcaccacctttgccaacaccagttgggagtgccaatcctcagcccgttcct
cctcagtctcatccttctaccagtagcagttcatctgatgggcttcgtgataatgtccct
tgtttgaaagttaaaaattctccacttaagcagtctccaggttatcagacagaattagtt
attcagttggtgtgggtgagtggagaaccaccgcaacaaataaccagtctggcagttaat
tcttcctatggattggtagtttttggcaattgtagtggcattgcaatggttgactacctc
cagaaagcagtactcctcaacctgggcactattgaattatgcggctccagtgatccttat
cggagagaaccccgatctcctcgtaaatctcgacagccttcaggagcaggtctgtgcgat
attagtgaagggactgtagccccagaagatcgctgcaaatctccaacttctggttcttca
tcaccacacaattcagatgatcaacaaaaagtgaataattttatagaaaaggtgaagatc
aaaagcagaaagttttccaagacggtagccagtgatatagcaaaaatgtcaaggaagtta
agcttgcctactgacctaaagcctgacttagatataaaagataattccttcagccgatca
cggagttcaagtgtaaccagcattgataaagaatcccgagaagcaatctctgctcttcat
ttctgtgaaacttttactcgaaaggcagattcagccccctccccatgtttgtgggttggt
actacattgggaacagtgcttgtcattgcactgaaccttcccccaggaggagagcaaaga
cttcttcagccagtaattgtgtctccaagtggtactatattgaggttaaaaggggcagtc
ctgagaatggcattcctggattccacaggctgcttaatgccacccgcatatgaatcctgg
aaagagcacaatgttcctgaagagaaggatgaaaaggagaaattgaaaaaacgaagacct
gtctctgtatctccctcctcttctcaggaaattagtgaaaaccagtatgcagtgatatgt
tctgaaaagcaagcaaaagtaatctcactgccaactcagaactgtgcttataagcaaaac
attacagagacctcatttgttcttcgtggagatattgtatcattgagtaacagtatctgc
cttgcctgcttctgtgccaatggacacattatgacttttagtttgccaagtttaagacct
ctattggatgtgtattacttgccccttaccaatatgcggatagccagaacgttctgcttc
accaacaatggacaagcattatatcttgtttcacctacagaaatccagagactcacttac
agtcaagagacctgtgaaaatcttcaggaaatgttgggtgaactcttcactcctgtagaa
acacctgaagcaccaaacaggggattctttaaaggcttgtttggaggtggtgcacaatct
cttgatagagaagaactatttggagaatcatcctcgggaaaggcttcaagaagtcttgct
cagcatatccctggccctggtggcatcgaaggcgtgaaaggagcagcatctggagttgtt
ggtgaattagcacgagccaggttggcactagatgaaagagggcagaaacttagtgacctg
gaagaaagaactgcagctatgttatccagtgcagattcattttctaaacatgctcacgag
atgatgttgaaatacaaagataagaagtggtaccagttctga
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integrated database retrieval system
